maxkfranz
commented
2 years ago Latest log:
[[ TRUNCATED ]]
registering cytoscape extensions
starting express server
Wed, 09 Mar 2022 16:21:00 GMT morgan deprecated default format: use combined format at node_modules/esm/esm.js:1:278827
Can not register `edgehandles` for `core` since `edgehandles` already exists in the prototype and can not be overridden
Can not register `vizmapper` for `core` since `vizmapper` already exists in the prototype and can not be overridden
Can not register `dataLocked` for `core` since `dataLocked` already exists in the prototype and can not be overridden
Can not register `exportCX2` for `core` since `exportCX2` already exists in the prototype and can not be overridden
Can not register `importCX2` for `core` since `importCX2` already exists in the prototype and can not be overridden
Can not register `exportJSON` for `core` since `exportJSON` already exists in the prototype and can not be overridden
Can not register `importJSON` for `core` since `importJSON` already exists in the prototype and can not be overridden
Can not register `popper` for `core` since `popper` already exists in the prototype and can not be overridden
Can not register `popper` for `collection` since `popper` already exists in the prototype and can not be overridden
Can not register `popperRef` for `core` since `popperRef` already exists in the prototype and can not be overridden
Can not register `popperRef` for `collection` since `popperRef` already exists in the prototype and can not be overridden
Importing CX networks to CE
✓ converts nodel label position CX values to CE
✓ imports networks to CE (290ms)
Exporting CE networks to CX
✓ converts CE style values to CX style values
✓ converts networks from CE to CX
✓ produces a CX type string for supported values
History (Snapshots)
1) "before each" hook: create fixture for "creates and lists snapshots"
2) "after each" hook for "creates and lists snapshots"
Network Analyser
✓ intialized correctly
✓ add a node and an edge
✓ remove a node and an edge
✓ update data properties
✓ remove two nodes at the same time
CytoscapeSyncher
on server, two instances
crud ops
3) client1 creates a doc, client2 loads it
4) "after each" hook for "client1 creates a doc, client2 loads it"
on two clients through proxy server
crud ops
5) "before each" hook for "client2 loads existing doc"
FetchError: request to http://localhost:5984/cydd358317-048a-4cb7-be76-7b9f76e821fd/ failed, reason: connect ECONNREFUSED 127.0.0.1:5984
at ClientRequest.<anonymous> (/usr/src/app/node_modules/pouchdb/node_modules/node-fetch/lib/index.js:1455:11)
at ClientRequest.emit (events.js:400:28)
at ClientRequest.emit (domain.js:475:12)
at Socket.socketErrorListener (_http_client.js:475:9)
at Socket.emit (events.js:400:28)
at Socket.emit (domain.js:475:12)
at emitErrorNT (internal/streams/destroy.js:106:8)
at emitErrorCloseNT (internal/streams/destroy.js:74:3)
at processTicksAndRejections (internal/process/task_queues.js:82:21)
6) "after each" hook for "client2 loads existing doc"
stopped express server
10 passing (4s)
6 failing
1) History (Snapshots)
"before each" hook: create fixture for "creates and lists snapshots":
FetchError: request to http://localhost:5984/history_test/ failed, reason: connect ECONNREFUSED 127.0.0.1:5984
at ClientRequest.<anonymous> (node_modules/pouchdb/node_modules/node-fetch/lib/index.js:1455:11)
at ClientRequest.emit (domain.js:475:12)
at Socket.socketErrorListener (_http_client.js:475:9)
at Socket.emit (domain.js:475:12)
at emitErrorNT (internal/streams/destroy.js:106:8)
at emitErrorCloseNT (internal/streams/destroy.js:74:3)
at processTicksAndRejections (internal/process/task_queues.js:82:21)
2) History (Snapshots)
"after each" hook for "creates and lists snapshots":
FetchError: request to http://localhost:5984/history_test/ failed, reason: connect ECONNREFUSED 127.0.0.1:5984
at ClientRequest.<anonymous> (node_modules/pouchdb/node_modules/node-fetch/lib/index.js:1455:11)
at ClientRequest.emit (domain.js:475:12)
at Socket.socketErrorListener (_http_client.js:475:9)
at Socket.emit (domain.js:475:12)
at emitErrorNT (internal/streams/destroy.js:106:8)
at emitErrorCloseNT (internal/streams/destroy.js:74:3)
at processTicksAndRejections (internal/process/task_queues.js:82:21)
3) CytoscapeSyncher
on server, two instances
crud ops
client1 creates a doc, client2 loads it:
FetchError: request to http://localhost:5984/test/ failed, reason: connect ECONNREFUSED 127.0.0.1:5984
at ClientRequest.<anonymous> (node_modules/pouchdb/node_modules/node-fetch/lib/index.js:1455:11)
at ClientRequest.emit (domain.js:475:12)
at Socket.socketErrorListener (_http_client.js:475:9)
at Socket.emit (domain.js:475:12)
at emitErrorNT (internal/streams/destroy.js:106:8)
at emitErrorCloseNT (internal/streams/destroy.js:74:3)
at processTicksAndRejections (internal/process/task_queues.js:82:21)
4) CytoscapeSyncher
on server, two instances
"after each" hook for "client1 creates a doc, client2 loads it":
FetchError: request to http://localhost:5984/test/ failed, reason: connect ECONNREFUSED 127.0.0.1:5984
at ClientRequest.<anonymous> (node_modules/pouchdb/node_modules/node-fetch/lib/index.js:1455:11)
at ClientRequest.emit (domain.js:475:12)
at Socket.socketErrorListener (_http_client.js:475:9)
at Socket.emit (domain.js:475:12)
at emitErrorNT (internal/streams/destroy.js:106:8)
at emitErrorCloseNT (internal/streams/destroy.js:74:3)
at processTicksAndRejections (internal/process/task_queues.js:82:21)
5) CytoscapeSyncher
on two clients through proxy server
"before each" hook for "client2 loads existing doc":
FetchError: invalid json response body at http://localhost:3000/api/document reason: Unexpected token < in JSON at position 0
at /usr/src/app/node_modules/node-fetch/lib/index.js:273:32
at processTicksAndRejections (internal/process/task_queues.js:95:5)
at async Context.<anonymous> (test/syncher-test.js:199:23)
6) CytoscapeSyncher
on two clients through proxy server
"after each" hook for "client2 loads existing doc":
Error: database is destroyed
at PouchDB.<anonymous> (node_modules/pouchdb/lib/index.js:273:29)
at PouchDB.<anonymous> (node_modules/argsarray/index.js:14:18)
at /usr/src/app/node_modules/pouchdb/lib/index.js:227:21
at new Promise (<anonymous>)
at PouchDB.<anonymous> (node_modules/pouchdb/lib/index.js:214:19)
at PouchDB.destroy (node_modules/argsarray/index.js:16:18)
at CytoscapeSyncher.delete (src/model/cytoscape-syncher.js:243:24)
at Context.<anonymous> (test/syncher-test.js:212:27)
at processImmediate (internal/timers.js:464:21)
npm ERR! code ELIFECYCLE
npm ERR! errno 6
npm ERR! cytoscape-explore@0.0.0 test:mocha: `cross-env TESTING=true mocha -r dotenv/config -r esm --exit`
npm ERR! Exit status 6
npm ERR!
npm ERR! Failed at the cytoscape-explore@0.0.0 test:mocha script.
npm ERR! This is probably not a problem with npm. There is likely additional logging output above.
npm ERR! A complete log of this run can be found in:
npm ERR! /root/.npm/_logs/2022-03-09T16_21_04_385Z-debug.log
ERROR: "test:mocha" exited with 6.
npm ERR!
Test failed. See above for more details.
{"code":1,"message":"The command '/bin/sh -c npm test # ensure test instances always pass tests before deploying' returned a non-zero code: 1"}
The command '/bin/sh -c npm test # ensure test instances always pass tests before deploying' returned a non-zero code: 1
Build has failed!
----------------------
Deploy failed!
Error: {"code":1,"message":"The command '/bin/sh -c npm test # ensure test instances always pass tests before deploying' returned a non-zero code: 1"}
The command '/bin/sh -c npm test # ensure test instances always pass tests before deploying' returned a non-zero code: 1
mikekucera
Describe the bug
CI is failing sporadically -- and always for CI deployments -- because the new Express server startups used in tests times out (2000ms).
To Reproduce
Expected behavior
The tests should pass when the dockerised CI deployment is made.
Server (please complete the following information):
Additional context
There could be a better way to start the server for tests, or we could increase some timeouts.