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d3b-center
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annoFuse
Filter and prioritize fusion calls
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Bug: duplication issue
#107
jharenza
opened
1 month ago
0
Feature request: Add updated oncogene list
#106
jharenza
opened
3 months ago
0
How to understand FusionName
#105
ShixiangWang
opened
4 months ago
1
Error with annotation
#104
jharenza
closed
1 month ago
5
Read expression file
#103
km-2021
closed
7 months ago
1
pipline failed
#102
km-2021
closed
1 month ago
1
remove demo columns not in putative oncogenic release file
#101
jharenza
closed
1 month ago
2
Bug: `fusion_driver()` returns multiple `DomainRetained` values
#100
kelseykeith
opened
1 year ago
2
Change get_pfam_domain.R
#99
zzgeng
closed
1 year ago
0
Update version
#98
sakshamphul
closed
1 year ago
4
Add custom type annotations
#97
sakshamphul
closed
1 year ago
15
Bug: Files missing from inst/extdata on master
#96
sickler-alex
closed
1 year ago
4
Added citation info about publication to the README file
#95
federicomarini
closed
2 years ago
0
Add pub to readme
#94
jharenza
closed
2 years ago
3
Feature request: customizable plot summary
#93
kgaonkar6
opened
3 years ago
0
Update feature: annoFuse summary plot in shiny
#92
kgaonkar6
opened
3 years ago
1
Referring to the new location for the repo of the example data
#91
federicomarini
closed
2 years ago
0
Bug: missing ref files and shinyFuse demo file
#90
jharenza
closed
2 years ago
9
Exon biomart function to generate user input hg version files
#89
kgaonkar6
closed
1 year ago
4
Road to bioc + unit-test
#88
federicomarini
closed
3 years ago
0
Unit test
#87
kgaonkar6
closed
3 years ago
6
Bug: annoFuse::annoFuse_single_sample with no filtered fusion calls errors out
#86
kgaonkar6
opened
3 years ago
0
Bug: First function "fusion_standardization" not working for star_fusion input
#85
mapostolides
closed
1 month ago
5
rename shinyFuse table download
#84
jharenza
opened
3 years ago
4
Bug: issue loading tidyr::one_of()
#83
kgaonkar6
opened
3 years ago
0
adding dplyr::one_of
#82
kgaonkar6
closed
3 years ago
2
Added release date for ShinyFuse in the about content section for the…
#81
federicomarini
closed
3 years ago
0
add shinyFuse launch date
#80
jharenza
closed
3 years ago
1
templates for issues and PR
#79
kgaonkar6
closed
3 years ago
0
Zenodo badge
#78
kgaonkar6
closed
3 years ago
0
adding latest Fig1
#77
kgaonkar6
closed
3 years ago
0
adding badge for README, and .github to ignored folders in build
#76
federicomarini
closed
3 years ago
0
Cleanup and gha
#75
federicomarini
closed
3 years ago
0
V0.9.0 shiny fuse
#74
kgaonkar6
closed
3 years ago
1
Add authors to description and update news
#73
jharenza
closed
3 years ago
1
add authors to package
#72
jharenza
closed
3 years ago
2
Broken breakpoint
#71
federicomarini
closed
3 years ago
0
reciprocal and Domain retention
#70
kgaonkar6
closed
3 years ago
2
frameshift domain retention update
#69
kgaonkar6
closed
3 years ago
0
update conjoin genes filter
#68
jharenza
closed
3 years ago
3
check if NA needs to be added for unmatched genes
#67
kgaonkar6
closed
3 years ago
0
add kinase domain retention info to putative oncogenic file
#66
jharenza
closed
3 years ago
4
tcga validation nb and files
#65
kgaonkar6
closed
3 years ago
0
TCGA notebook validation plots
#64
kgaonkar6
closed
3 years ago
2
Spanning 100
#63
kgaonkar6
closed
3 years ago
0
cleanup of gene reference lists
#62
jharenza
closed
3 years ago
3
update instructions for filtering of numeric columns
#61
jharenza
closed
3 years ago
2
spanningDelta cutoff 100 for demo file
#60
kgaonkar6
closed
3 years ago
3
project specific example
#59
kgaonkar6
closed
4 years ago
6
filtering on shiny server
#58
jharenza
closed
3 years ago
4
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