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daijiang
/
phyr
Functions for phylogenetic analyses
https://daijiang.github.io/phyr/
GNU General Public License v3.0
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communityPGLMM.plot.re()
#40
arives
opened
5 years ago
4
update readme
#39
daijiang
closed
5 years ago
0
math.h not found
#38
daijiang
opened
5 years ago
0
New fm
#37
daijiang
closed
5 years ago
0
Fix cor phylo inputs
#36
lucasnell
closed
5 years ago
0
Predict for communityPGLMM
#35
vmikk
opened
5 years ago
0
Bayesian p-values and code deduplication
#34
vmikk
closed
5 years ago
1
bug in dat prep for pglmm
#33
daijiang
closed
6 years ago
0
Bayes
#32
daijiang
closed
6 years ago
2
Fix binomial plus zerinfl
#31
rdinnager
closed
6 years ago
1
communityPGLMM.bayes
#30
arives
opened
6 years ago
21
fixef
#29
arives
closed
6 years ago
7
binaryPGLMM
#28
arives
opened
6 years ago
2
Bayes update
#27
rdinnager
closed
6 years ago
6
Morefamily
#26
daijiang
closed
6 years ago
25
Fix cor phylo v
#25
lucasnell
closed
6 years ago
1
update documents
#24
daijiang
closed
6 years ago
0
compile error
#23
daijiang
closed
6 years ago
1
V matrix in cor_phylo
#22
lucasnell
closed
6 years ago
0
cor_phylo with nlopt
#21
lucasnell
closed
6 years ago
1
communityPGLMM.plot.random.effects doesn't work well
#20
arives
opened
6 years ago
2
Update pglmm.R
#19
daijiang
closed
6 years ago
0
tweek plot re
#18
daijiang
closed
6 years ago
0
Psv cpp
#17
daijiang
closed
6 years ago
0
structuring covariance matrices in communityPGLMM
#16
arives
opened
6 years ago
7
Optimization in C++ using nlopt
#15
lucasnell
closed
6 years ago
7
C++ version of optim
#14
lucasnell
closed
6 years ago
3
simplified the inla_formula
#13
daijiang
closed
6 years ago
0
Bayes fix (plus Poisson support)
#12
rdinnager
closed
6 years ago
1
Package to use/examine
#11
lucasnell
opened
6 years ago
4
21st century
#10
arives
closed
6 years ago
1
Include bootstrap code to communityPGLMM
#9
daijiang
opened
6 years ago
0
Bipartite
#8
daijiang
closed
6 years ago
0
allow sp__@var_other_than_site
#7
daijiang
closed
6 years ago
1
INLA based Bayesian communityPGLMM implemented
#6
rdinnager
closed
6 years ago
1
communityPGLMM does not accept a covariance matrix
#5
rdinnager
closed
6 years ago
2
Memory efficient version of phylogenetic diversity metrics
#4
rdinnager
opened
6 years ago
5
To Do
#3
daijiang
closed
6 years ago
0
package paper
#2
daijiang
opened
6 years ago
0
SS2 within psv() has different results if X matrix has different order in species
#1
daijiang
opened
6 years ago
0
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