I want to use TESLA to run multi-ancestry TWAS analysis, but the wiki and help doc make me confused. Since our GWAS summary statistics were not generated by rvtest, some variables, such as HWE, Call_rate, etc., were not included in our results. I wonder to know which variables are necessary.
Dear Liu Lab,
I want to use TESLA to run multi-ancestry TWAS analysis, but the wiki and help doc make me confused. Since our GWAS summary statistics were not generated by rvtest, some variables, such as HWE, Call_rate, etc., were not included in our results. I wonder to know which variables are necessary.
Thanks tql