Closed PeterRobots closed 11 months ago
A warning is generated when using the command on a sequence. Found when running unittests.
Python==3.8.0 async-timeout==4.0.2 attrs==22.2.0 biopython==1.79 certifi==2022.12.7 charset-normalizer==3.0.1 click==8.1.3 Cython==0.29.30 Deprecated==1.2.13 docker==5.0.3 exceptiongroup==1.1.0 Flask==2.2.2 idna==3.4 importlib-metadata==6.0.0 iniconfig==2.0.0 itsdangerous==2.1.2 Jinja2==3.1.2 MarkupSafe==2.1.2 mock==4.0.3 numpy==1.24.1 packaging==23.0 pkg_resources==0.0.0 pluggy==1.0.0 primer3-py==0.6.1 pybedtools==0.9.0 pycodestyle==2.9.1 pyfakefs==4.6.2 pysam==0.16.0.1 pytest==7.2.1 redis==4.3.3 requests==2.28.2 six==1.16.0 tomli==2.0.1 urllib3==1.26.14 websocket-client==1.4.2 Werkzeug==2.2.2 wrapt==1.14.1 zipp==3.11.0
It's resolved by closing self.seqfn after reading and writing to fout.
A warning is generated when using the command on a sequence. Found when running unittests.
It's resolved by closing self.seqfn after reading and writing to fout.