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datacarpentry
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shell-genomics
Introduction to the Command Line for Genomics
https://datacarpentry.org/shell-genomics
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Update Workflows to Version 0.16.6
#360
carpentries-bot
opened
1 month ago
1
Update Workflows to Version 0.16.5
#359
carpentries-bot
closed
1 month ago
1
Lacking setup page
#358
BenjaminSchwessinger
closed
1 month ago
0
Update index.md fix setup link
#357
ggrimes
closed
1 month ago
1
Introducing the shell: The order of the commands
#356
ATCGpsy
opened
4 months ago
0
Fix file permission flags in example
#355
p-j-smith
closed
5 months ago
1
Link to etherpad template in instructor notes
#354
p-j-smith
closed
6 months ago
1
Make the etherpad template more generic
#353
p-j-smith
closed
6 months ago
1
Add discussion of SFTP
#352
p-j-smith
opened
11 months ago
1
Update Workflows to Version 0.13.0
#351
carpentries-bot
closed
1 year ago
1
Added Etherpad template for lesson
#350
ggrimes
closed
1 year ago
1
Update slack links
#349
froggleston
closed
1 year ago
2
Transfering local to cloud drop-down menu broken
#348
sstevens2
closed
11 months ago
1
Addition of a *bin* or *scripts* directory in episode 6. Project organization
#347
GeorgiaBreckell
opened
1 year ago
1
Fix broken expansion boxes
#346
bkmgit
closed
11 months ago
5
Explain how to do arithmetic
#345
bkmgit
closed
6 months ago
1
Finish bad sequences calculation
#344
bkmgit
closed
6 months ago
1
Fix #339 to correct contributing links
#343
cpauvert
closed
1 year ago
5
fix uninformative link spotted by `sandpaper::validate_lesson()`
#342
cpauvert
closed
1 year ago
2
remove legacy jekyll template inclusion
#341
cpauvert
closed
1 year ago
3
Legacy Jekyll template `include gh_variables.html` remains in the front page
#340
cpauvert
closed
1 year ago
0
Links need to be fixed in CONTRIBUTING.md
#339
tobyhodges
closed
1 year ago
0
fix indents in episode 4
#338
zkamvar
closed
1 year ago
1
update zenodo json for lesson release
#337
tobyhodges
closed
1 year ago
0
Transition To Workbench in May
#336
zkamvar
closed
1 year ago
10
Update to final version of styles lesson template
#335
tobyhodges
closed
1 year ago
0
Add a Tip for command line navigation as part of "Naviational Shortcuts" in episode 2
#334
jlchang
opened
1 year ago
3
Update initial login screen appearance
#333
kerchner
closed
1 year ago
0
Introduction to shell: How to exit the shell
#332
mariehidjo
opened
1 year ago
1
Update lesson 5 to use scp as default
#331
martinosorb
closed
1 year ago
0
Minor changes and typos
#330
martinosorb
closed
1 year ago
3
Typos in Introducing the Shell lesson, How to access the shell section
#329
awnorowski
closed
1 year ago
1
Introducing the Shell - Overview language - local vs remote
#328
awnorowski
opened
1 year ago
1
Fix typo
#327
evelyngreeves
closed
1 year ago
1
A typo in the introduction part
#326
RanZhou
closed
1 year ago
2
pull
#325
gurinina
closed
1 year ago
0
correct number of lines for bad_reads.txt
#324
dpaudel
closed
1 year ago
1
Update index.md
#323
clarajegousse
closed
1 year ago
0
missing prompt symbol
#322
sstevens2
closed
1 year ago
0
Callout box issue
#321
sstevens2
closed
1 year ago
0
Adjusted hyperlink name
#320
AliciaHadingham
closed
1 year ago
0
Lesson contribution - instructor checkout - Working with files and directories
#319
Elahep
closed
10 months ago
1
Episode 6. Addition of a "cut" command to remove line numbers in history
#318
ckigenk
opened
2 years ago
2
shell-genomics/05-writing-scripts -incorrect output displayed for $ ls -l bad-reads-script.sh
#317
Parcelli
closed
5 months ago
1
Grep output doesn't match what's in the lesson in a way that breaks the example
#316
JCSzamosi
opened
2 years ago
7
Define `PS1`
#315
eKariuki-sleepy
closed
1 year ago
1
Redirection - Adding an example before determining read quality
#314
kswichte
opened
2 years ago
0
shell-genomics/02-the-filesystem - hidden directory exercise
#313
duanyuncheng
opened
2 years ago
1
Inconsistent usage of PuTTY/Git Bash (for Windows users)
#312
ac1513
closed
1 year ago
3
Replaced many "it" with better words
#311
jsgro
closed
2 years ago
4
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