Please cite from BioRxiv https://www.biorxiv.org/content/early/2018/05/14/103648.
This code introduces a word and a sentence embedding method to compare 2 Gene Ontology terms.
Go to DataSource
folder to download all the needed files (more instruction inside).
Go to Code
folder to download all the source code (more instruction inside).
ROCplots
contains plots for the Receiver Operating Characteristic curve in the classification of human protein-protein network, and human/mouse/fly orthologs.
TrainingInferSent
shows you how to train the InferSent model.
getAncestors
shows you how to get the ancestors of a GO term.
In this project, along with the main result, we also created Gene names to vectors.