dattalab / moseq2-extract

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feat!: adding slurm support for extract #134

Closed versey-sherry closed 3 years ago

versey-sherry commented 3 years ago

Issue being fixed or feature implemented

The current setup for extract only supports extracting found sessions linearly. Now functionality has been added to moseq2-extract to put together commands for extracting sessions parallelly with slurm. https://github.com/dattalab/moseq2-app/issues/148

What was done?

Adding Slurm support for both GUI and CLI. For CLI, I modified batch-extract CLI function. Related PR in moseq2-app https://github.com/dattalab/moseq2-app/pull/172

How Has This Been Tested?

CI and locally.

Breaking Changes

extract and batch-extract has cluster-type as an option and default to 'local'.

Checklist:

versey-sherry commented 3 years ago

image