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dattalab / moseq2-extract

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Feature request: CLI moseq2-extract extract should print which file it's working on #138

Open jonahpearl opened 3 years ago

jonahpearl commented 3 years ago

If using CLI to run moseq2-extract extract, I would find it useful to have filenames in the .out files from slurm so that if one fails, it's easy to tell which session it was. Often the error message due to failing includes the file name, but not always. A line like "Extracting from file ..." would suffice.

wingillis commented 3 years ago

Why not add a print statement to your job submission script? I.e.,


echo Extracting from file $file

moseq2-extract extract $file
versey-sherry commented 2 years ago

@jonahpearl @wingillis Is this issue resolved? If yes I will close the issue.