Hello David

I am trying to install ReporteRs on a mac and get the following error

could you please advise

Thanks

Amit Taneja ################################### [1] "/Users/AmitTaneja/Library/R/3.3/library/rJava"

require(rJava,lib.loc = .libPaths()[1]) Loading required package: rJava Error : .onLoad failed in loadNamespace() for 'rJava', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared object '/Users/AmitTaneja/Library/R/3.3/library/rJava/libs/rJava.so': dlopen(/Users/AmitTaneja/Library/R/3.3/library/rJava/libs/rJava.so, 6): Library not loaded: @rpath/libjvm.dylib Referenced from: /Users/AmitTaneja/Library/R/3.3/library/rJava/libs/rJava.so Reason: image not found devtools::install_github('davidgohel/ReporteRs') Error in loadNamespace(name) : there is no package called ‘devtools’ install.packages("devtools",dependencies = T) Installing package into ‘/Users/AmitTaneja/Library/R/3.3/library’ (as ‘lib’ is unspecified) Warning in install.packages : dependency ‘BiocInstaller’ is not available also installing the dependencies ‘irlba’, ‘igraph’, ‘xml2’, ‘git2r’, ‘lintr’, ‘rversions’

octet-stream' length 218471 bytes (213 KB)

downloaded 213 KB

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/igraph_1.0.1.tar.gz' Content type 'application/octet-stream' length 3328353 bytes (3.2 MB)

downloaded 3.2 MB

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/xml2_1.0.0.tar.gz' Content type 'application/octet-stream' length 100462 bytes (98 KB)

downloaded 98 KB

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/git2r_0.15.0.tar.gz' Content type 'application/octet-stream' length 1084978 bytes (1.0 MB)

downloaded 1.0 MB

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/lintr_1.0.0.tar.gz' Content type 'application/octet-stream' length 51014 bytes (49 KB)

downloaded 49 KB

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/rversions_1.0.3.tar.gz' Content type 'application/octet-stream' length 4843 bytes

downloaded 4843 bytes

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/devtools_1.12.0.tar.gz' Content type 'application/octet-stream' length 467113 bytes (456 KB)

downloaded 456 KB

installing source package ‘irlba’ ... package ‘irlba’ successfully unpacked and MD5 sums checked libs clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3.2-MRO/Resources/library/Matrix/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c irlb.c -o irlb.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3.2-MRO/Resources/library/Matrix/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c utility.c -o utility.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib -o irlba.so irlb.o utility.o -framework Accelerate -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64 -L/usr/local/lib/x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: directory not found for option '-L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib' ld: warning: directory not found for option '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64' ld: warning: directory not found for option '-L/usr/local/lib/x86_64' ld: warning: directory not found for option '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3' ld: library not found for -lgfortran clang: error: linker command failed with exit code 1 (use -v to see invocation) make: *** [irlba.so] Error 1 ERROR: compilation failed for package ‘irlba’
removing ‘/Users/AmitTaneja/Library/R/3.3/library/irlba’ Warning in install.packages : installation of package ‘irlba’ had non-zero exit status
installing source package ‘xml2’ ... package ‘xml2’ successfully unpacked and MD5 sums checked Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 Using PKG_LIBS=-L/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/lib -lxml2 -lz -lpthread -licucore -lm libs clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c RcppExports.cpp -o RcppExports.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c connection.cpp -o connection.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_doc.cpp -o xml2_doc.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_init.cpp -o xml2_init.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_namespace.cpp -o xml2_namespace.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_node.cpp -o xml2_node.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_url.cpp -o xml2_url.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_xpath.cpp -o xml2_xpath.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml_push.cpp -o xml_push.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib -o xml2.so RcppExports.o connection.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_url.o xml2_xpath.o xml_push.o -L/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/lib -lxml2 -lz -lpthread -licucore -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: directory not found for option '-L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib' ld: file not found: /usr/lib/system/libsystem_symptoms.dylib for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) make: *** [xml2.so] Error 1 ERROR: compilation failed for package ‘xml2’
removing ‘/Users/AmitTaneja/Library/R/3.3/library/xml2’ Warning in install.packages : installation of package ‘xml2’ had non-zero exit status
installing source package ‘git2r’ ... ** package ‘git2r’ successfully unpacked and MD5 sums checked checking build system type... x86_64-apple-darwin15.6.0 checking host system type... x86_64-apple-darwin15.6.0 checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for brew... yes checking for library containing inflate... -lz checking for pkg-config... no configure: WARNING: "pkg-config not found. Proceeding without it" checking for library containing EVP_EncryptInit... -lcrypto checking for library containing SSL_library_init... -lssl checking for library containing libssh2_version... no configure: WARNING:

Unable to find the LibSSH2 library on this system. Building a version without support for SSH transport.

To build with SSH support, please install: libssh2-1-dev (package on e.g. Debian and Ubuntu) libssh2-devel (package on e.g. Fedora, CentOS and RHEL) libssh2 (Homebrew package on OS X) and try again.

If the LibSSH2 library is installed on your system but the git2r configuration is unable to find it, you can specify the include and lib path to LibSSH2 with: R CMD INSTALL --configure-args='--with-libssh2-include=INCLUDE_PATH --with-libssh2-lib=LIB_PATH' git2r

checking for ld used by clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for shared library run path origin... /bin/sh: tools/config.rpath: No such file or directory done checking how to run the C preprocessor... clang -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for iconv... yes checking for working iconv... yes checking how to link with libiconv... -liconv checking for iconv declaration... extern size_t iconv (iconv_t cd, char inbuf, size_t inbytesleft, char outbuf, size_t outbytesleft); checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 7.43.0 checking whether libcurl is usable... yes checking for curl_free... yes checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking size of void*... 8 checking for struct stat.st_atimespec... yes checking for futimens... no checking for qsort_r... yes checking for qsort_s... no checking if '-Wno-unused-function' is supported... yes

----- Results of the git2r package configure -----

OpenSSL to talk over HTTPS...........: yes LibSSH2 to enable the SSH transport..: no

configure: creating ./config.status config.status: creating src/Makevars ** libs clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r.c -o git2r.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_arg.c -o git2r_arg.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_blame.c -o git2r_blame.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_blob.c -o git2r_blob.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_branch.c -o git2r_branch.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_checkout.c -o git2r_checkout.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_clone.c -o git2r_clone.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_commit.c -o git2r_commit.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_config.c -o git2r_config.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_cred.c -o git2r_cred.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_diff.c -o git2r_diff.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_error.c -o git2r_error.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_graph.c -o git2r_graph.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_index.c -o git2r_index.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_libgit2.c -o git2r_libgit2.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_merge.c -o git2r_merge.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_note.c -o git2r_note.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_object.c -o git2r_object.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_odb.c -o git2r_odb.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_oid.c -o git2r_oid.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_push.c -o git2r_push.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_reference.c -o git2r_reference.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_reflog.c -o git2r_reflog.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_remote.c -o git2r_remote.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_repository.c -o git2r_repository.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_reset.c -o git2r_reset.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_revparse.c -o git2r_revparse.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_revwalk.c -o git2r_revwalk.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_signature.c -o git2r_signature.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_stash.c -o git2r_stash.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_status.c -o git2r_status.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_tag.c -o git2r_tag.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_transfer.c -o git2r_transfer.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_tree.c -o git2r_tree.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/annotated_commit.c -o libgit2/src/annotated_commit.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/attr.c -o libgit2/src/attr.o libgit2/src/attr.c:10:1: warning: unused function 'kh_clear_str' [-Wunused-function] GITUSE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' KHASH_IMPL(str, static kh_inline, const char , void , 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void khclear##name(kh_##name##_t *h) \ ^

:117:1: note: expanded from here kh_clear_str ^ libgit2/src/attr.c:10:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/attrcache.c -o libgit2/src/attrcache.o libgit2/src/attrcache.c:8:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_str ^ libgit2/src/attrcache.c:8:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/attr_file.c -o libgit2/src/attr_file.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/blame.c -o libgit2/src/blame.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/blame_git.c -o libgit2/src/blame_git.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/blob.c -o libgit2/src/blob.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/branch.c -o libgit2/src/branch.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/buffer.c -o libgit2/src/buffer.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/buf_text.c -o libgit2/src/buf_text.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/cache.c -o libgit2/src/cache.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/checkout.c -o libgit2/src/checkout.o libgit2/src/checkout.c:37:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :168:1: note: expanded from here kh_clear_str ^ libgit2/src/checkout.c:37:1: warning: unused function 'kh_get_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:225:16: note: expanded from macro '__KHASH_IMPL' SCOPE khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key) \ ^ :171:1: note: expanded from here kh_get_str ^ libgit2/src/checkout.c:37:1: warning: unused function 'kh_put_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:302:16: note: expanded from macro '__KHASH_IMPL' SCOPE khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret) \ ^ :177:1: note: expanded from here kh_put_str ^ libgit2/src/checkout.c:37:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :182:1: note: expanded from here kh_del_str ^ 4 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/cherrypick.c -o libgit2/src/cherrypick.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/clone.c -o libgit2/src/clone.o libgit2/src/clone.c:464:20: warning: unused function 'repository_base' [-Wunused-function] static const char *repository_base(git_repository *repo) ^ 1 warning generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/commit.c -o libgit2/src/commit.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/commit_list.c -o libgit2/src/commit_list.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/config.c -o libgit2/src/config.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/config_cache.c -o libgit2/src/config_cache.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/config_file.c -o libgit2/src/config_file.o libgit2/src/config_file.c:24:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :156:1: note: expanded from here kh_clear_str ^ libgit2/src/config_file.c:24:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :170:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/crlf.c -o libgit2/src/crlf.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/curl_stream.c -o libgit2/src/curl_stream.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/date.c -o libgit2/src/date.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/delta-apply.c -o libgit2/src/delta-apply.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/delta.c -o libgit2/src/delta.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/describe.c -o libgit2/src/describe.o libgit2/src/describe.c:22:1: warning: unused function 'kh_clear_oid' [-Wunused-function] GIT__USE_OIDMAP ^ libgit2/src/oidmap.h:31:2: note: expanded from macro 'GIT__USE_OIDMAP' __KHASH_IMPL(oid, static kh_inline, const git_oid *, void *, 1, git_oidmap_hash, git_oid_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_oid ^ libgit2/src/describe.c:22:1: warning: unused function 'kh_del_oid' [-Wunused-function] libgit2/src/oidmap.h:31:2: note: expanded from macro 'GIT__USE_OIDMAP' __KHASH_IMPL(oid, static kh_inline, const git_oid *, void *, 1, git_oidmap_hash, git_oid_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_oid ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff.c -o libgit2/src/diff.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_driver.c -o libgit2/src/diff_driver.o libgit2/src/diff_driver.c:20:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_str ^ libgit2/src/diff_driver.c:20:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_file.c -o libgit2/src/diff_file.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_patch.c -o libgit2/src/diff_patch.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_print.c -o libgit2/src/diff_print.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_stats.c -o libgit2/src/diff_stats.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_tform.c -o libgit2/src/diff_tform.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_xdiff.c -o libgit2/src/diff_xdiff.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/errors.c -o libgit2/src/errors.o In file included from libgit2/src/errors.c:8: libgit2/src/global.h:22:11: fatal error: 'openssl/ssl.h' file not found # include ^ 1 error generated. make: *** [libgit2/src/errors.o] Error 1 ERROR: compilation failed for package ‘git2r’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/git2r’ Warning in install.packages : installation of package ‘git2r’ had non-zero exit status ERROR: dependency ‘irlba’ is not available for package ‘igraph’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/igraph’ Warning in install.packages : installation of package ‘igraph’ had non-zero exit status ERROR: dependency ‘xml2’ is not available for package ‘rversions’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/rversions’ Warning in install.packages : installation of package ‘rversions’ had non-zero exit status ERROR: dependency ‘git2r’ is not available for package ‘devtools’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/devtools’ Warning in install.packages : installation of package ‘devtools’ had non-zero exit status ERROR: dependency ‘igraph’ is not available for package ‘lintr’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/lintr’ Warning in install.packages : installation of package ‘lintr’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/gg/8yb0vmfs74l4k8hb5xrw66mr0000gn/T/Rtmp4kbwiw/downloaded_packages’ ########################################### R version 3.3.2 (2016-10-31) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: OS X El Capitan 10.11.6 locale: [1] nl_NL.UTF-8/nl_NL.UTF-8/nl_NL.UTF-8/C/nl_NL.UTF-8/nl_NL.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] RevoUtils_10.0.2 tools_3.3.2 > [1] "/Users/AmitTaneja/Library/R/3.3/library/rJava" > require(rJava,lib.loc = .libPaths()[1]) Loading required package: rJava Error : .onLoad failed in loadNamespace() for 'rJava', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared object '/Users/AmitTaneja/Library/R/3.3/library/rJava/libs/rJava.so': dlopen(/Users/AmitTaneja/Library/R/3.3/library/rJava/libs/rJava.so, 6): Library not loaded: @rpath/libjvm.dylib Referenced from: /Users/AmitTaneja/Library/R/3.3/library/rJava/libs/rJava.so Reason: image not found > devtools::install_github('davidgohel/ReporteRs') Error in loadNamespace(name) : there is no package called ‘devtools’ > install.packages("devtools",dependencies = T) Installing package into ‘/Users/AmitTaneja/Library/R/3.3/library’ (as ‘lib’ is unspecified) Warning in install.packages : dependency ‘BiocInstaller’ is not available also installing the dependencies ‘irlba’, ‘igraph’, ‘xml2’, ‘git2r’, ‘lintr’, ‘rversions’ trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/irlba_2.1.2.tar.gz' Content type 'application/octet-stream' length 218471 bytes (213 KB) ================================================== downloaded 213 KB trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/igraph_1.0.1.tar.gz' Content type 'application/octet-stream' length 3328353 bytes (3.2 MB) ================================================== downloaded 3.2 MB trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/xml2_1.0.0.tar.gz' Content type 'application/octet-stream' length 100462 bytes (98 KB) ================================================== downloaded 98 KB trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/git2r_0.15.0.tar.gz' Content type 'application/octet-stream' length 1084978 bytes (1.0 MB) ================================================== downloaded 1.0 MB trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/lintr_1.0.0.tar.gz' Content type 'application/octet-stream' length 51014 bytes (49 KB) ================================================== downloaded 49 KB trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/rversions_1.0.3.tar.gz' Content type 'application/octet-stream' length 4843 bytes ================================================== downloaded 4843 bytes trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/devtools_1.12.0.tar.gz' Content type 'application/octet-stream' length 467113 bytes (456 KB) ================================================== downloaded 456 KB * installing *source* package ‘irlba’ ... ** package ‘irlba’ successfully unpacked and MD5 sums checked ** libs clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3.2-MRO/Resources/library/Matrix/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c irlb.c -o irlb.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3.2-MRO/Resources/library/Matrix/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c utility.c -o utility.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib -o irlba.so irlb.o utility.o -framework Accelerate -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64 -L/usr/local/lib/x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: directory not found for option '-L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib' ld: warning: directory not found for option '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64' ld: warning: directory not found for option '-L/usr/local/lib/x86_64' ld: warning: directory not found for option '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3' ld: library not found for -lgfortran clang: error: linker command failed with exit code 1 (use -v to see invocation) make: *** [irlba.so] Error 1 ERROR: compilation failed for package ‘irlba’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/irlba’ Warning in install.packages : installation of package ‘irlba’ had non-zero exit status * installing *source* package ‘xml2’ ... ** package ‘xml2’ successfully unpacked and MD5 sums checked Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 Using PKG_LIBS=-L/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/lib -lxml2 -lz -lpthread -licucore -lm ** libs clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c RcppExports.cpp -o RcppExports.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c connection.cpp -o connection.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_doc.cpp -o xml2_doc.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_init.cpp -o xml2_init.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_namespace.cpp -o xml2_namespace.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_node.cpp -o xml2_node.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_url.cpp -o xml2_url.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml2_xpath.cpp -o xml2_xpath.o clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2 -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I"/Users/AmitTaneja/Library/R/3.3/library/Rcpp/include" -I"/Users/AmitTaneja/Library/R/3.3/library/BH/include" -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c xml_push.cpp -o xml_push.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib -o xml2.so RcppExports.o connection.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_url.o xml2_xpath.o xml_push.o -L/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/lib -lxml2 -lz -lpthread -licucore -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: directory not found for option '-L/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/lib' ld: file not found: /usr/lib/system/libsystem_symptoms.dylib for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) make: *** [xml2.so] Error 1 ERROR: compilation failed for package ‘xml2’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/xml2’ Warning in install.packages : installation of package ‘xml2’ had non-zero exit status * installing *source* package ‘git2r’ ... ** package ‘git2r’ successfully unpacked and MD5 sums checked checking build system type... x86_64-apple-darwin15.6.0 checking host system type... x86_64-apple-darwin15.6.0 checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for brew... yes checking for library containing inflate... -lz checking for pkg-config... no configure: WARNING: "pkg-config not found. Proceeding without it" checking for library containing EVP_EncryptInit... -lcrypto checking for library containing SSL_library_init... -lssl checking for library containing libssh2_version... no configure: WARNING: --------------------------------------------- Unable to find the LibSSH2 library on this system. Building a version without support for SSH transport. To build with SSH support, please install: libssh2-1-dev (package on e.g. Debian and Ubuntu) libssh2-devel (package on e.g. Fedora, CentOS and RHEL) libssh2 (Homebrew package on OS X) and try again. If the LibSSH2 library is installed on your system but the git2r configuration is unable to find it, you can specify the include and lib path to LibSSH2 with: R CMD INSTALL --configure-args='--with-libssh2-include=INCLUDE_PATH --with-libssh2-lib=LIB_PATH' git2r --------------------------------------------- checking for ld used by clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for shared library run path origin... /bin/sh: tools/config.rpath: No such file or directory done checking how to run the C preprocessor... clang -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for iconv... yes checking for working iconv... yes checking how to link with libiconv... -liconv checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 7.43.0 checking whether libcurl is usable... yes checking for curl_free... yes checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking size of void*... 8 checking for struct stat.st_atimespec... yes checking for futimens... no checking for qsort_r... yes checking for qsort_s... no checking if '-Wno-unused-function' is supported... yes ----- Results of the git2r package configure ----- OpenSSL to talk over HTTPS...........: yes LibSSH2 to enable the SSH transport..: no -------------------------------------------------- configure: creating ./config.status config.status: creating src/Makevars ** libs clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r.c -o git2r.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_arg.c -o git2r_arg.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_blame.c -o git2r_blame.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_blob.c -o git2r_blob.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_branch.c -o git2r_branch.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_checkout.c -o git2r_checkout.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_clone.c -o git2r_clone.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_commit.c -o git2r_commit.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_config.c -o git2r_config.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_cred.c -o git2r_cred.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_diff.c -o git2r_diff.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_error.c -o git2r_error.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_graph.c -o git2r_graph.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_index.c -o git2r_index.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_libgit2.c -o git2r_libgit2.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_merge.c -o git2r_merge.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_note.c -o git2r_note.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_object.c -o git2r_object.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_odb.c -o git2r_odb.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_oid.c -o git2r_oid.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_push.c -o git2r_push.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_reference.c -o git2r_reference.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_reflog.c -o git2r_reflog.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_remote.c -o git2r_remote.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_repository.c -o git2r_repository.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_reset.c -o git2r_reset.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_revparse.c -o git2r_revparse.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_revwalk.c -o git2r_revwalk.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_signature.c -o git2r_signature.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_stash.c -o git2r_stash.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_status.c -o git2r_status.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_tag.c -o git2r_tag.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_transfer.c -o git2r_transfer.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c git2r_tree.c -o git2r_tree.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/annotated_commit.c -o libgit2/src/annotated_commit.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/attr.c -o libgit2/src/attr.o libgit2/src/attr.c:10:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_str ^ libgit2/src/attr.c:10:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/attrcache.c -o libgit2/src/attrcache.o libgit2/src/attrcache.c:8:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_str ^ libgit2/src/attrcache.c:8:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/attr_file.c -o libgit2/src/attr_file.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/blame.c -o libgit2/src/blame.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/blame_git.c -o libgit2/src/blame_git.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/blob.c -o libgit2/src/blob.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/branch.c -o libgit2/src/branch.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/buffer.c -o libgit2/src/buffer.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/buf_text.c -o libgit2/src/buf_text.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/cache.c -o libgit2/src/cache.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/checkout.c -o libgit2/src/checkout.o libgit2/src/checkout.c:37:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :168:1: note: expanded from here kh_clear_str ^ libgit2/src/checkout.c:37:1: warning: unused function 'kh_get_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:225:16: note: expanded from macro '__KHASH_IMPL' SCOPE khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key) \ ^ :171:1: note: expanded from here kh_get_str ^ libgit2/src/checkout.c:37:1: warning: unused function 'kh_put_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:302:16: note: expanded from macro '__KHASH_IMPL' SCOPE khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret) \ ^ :177:1: note: expanded from here kh_put_str ^ libgit2/src/checkout.c:37:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :182:1: note: expanded from here kh_del_str ^ 4 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/cherrypick.c -o libgit2/src/cherrypick.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/clone.c -o libgit2/src/clone.o libgit2/src/clone.c:464:20: warning: unused function 'repository_base' [-Wunused-function] static const char *repository_base(git_repository *repo) ^ 1 warning generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/commit.c -o libgit2/src/commit.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/commit_list.c -o libgit2/src/commit_list.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/config.c -o libgit2/src/config.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/config_cache.c -o libgit2/src/config_cache.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/config_file.c -o libgit2/src/config_file.o libgit2/src/config_file.c:24:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :156:1: note: expanded from here kh_clear_str ^ libgit2/src/config_file.c:24:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :170:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/crlf.c -o libgit2/src/crlf.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/curl_stream.c -o libgit2/src/curl_stream.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/date.c -o libgit2/src/date.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/delta-apply.c -o libgit2/src/delta-apply.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/delta.c -o libgit2/src/delta.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/describe.c -o libgit2/src/describe.o libgit2/src/describe.c:22:1: warning: unused function 'kh_clear_oid' [-Wunused-function] GIT__USE_OIDMAP ^ libgit2/src/oidmap.h:31:2: note: expanded from macro 'GIT__USE_OIDMAP' __KHASH_IMPL(oid, static kh_inline, const git_oid *, void *, 1, git_oidmap_hash, git_oid_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_oid ^ libgit2/src/describe.c:22:1: warning: unused function 'kh_del_oid' [-Wunused-function] libgit2/src/oidmap.h:31:2: note: expanded from macro 'GIT__USE_OIDMAP' __KHASH_IMPL(oid, static kh_inline, const git_oid *, void *, 1, git_oidmap_hash, git_oid_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_oid ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff.c -o libgit2/src/diff.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_driver.c -o libgit2/src/diff_driver.o libgit2/src/diff_driver.c:20:1: warning: unused function 'kh_clear_str' [-Wunused-function] GIT__USE_STRMAP ^ libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_clear_##name(kh_##name##_t *h) \ ^ :117:1: note: expanded from here kh_clear_str ^ libgit2/src/diff_driver.c:20:1: warning: unused function 'kh_del_str' [-Wunused-function] libgit2/src/strmap.h:24:2: note: expanded from macro 'GIT__USE_STRMAP' __KHASH_IMPL(str, static kh_inline, const char *, void *, 1, kh_str_hash_func, kh_str_hash_equal) ^ libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL' SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ ^ :131:1: note: expanded from here kh_del_str ^ 2 warnings generated. clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_file.c -o libgit2/src/diff_file.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_patch.c -o libgit2/src/diff_patch.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_print.c -o libgit2/src/diff_print.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_stats.c -o libgit2/src/diff_stats.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_tform.c -o libgit2/src/diff_tform.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/diff_xdiff.c -o libgit2/src/diff_xdiff.o clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DGIT_COMMON_CRYPTO -DGIT_CURL -DGIT_USE_ICONV -DGIT_ARCH_64 -DGIT_USE_STAT_ATIMESPEC -DHAVE_QSORT_R -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -Wno-deprecated-declarations -Wno-unused-function -fPIC -I/Users/Shared/Jenkins/workspace/External-R-3.3.2/vendor/build/include -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include -c libgit2/src/errors.c -o libgit2/src/errors.o In file included from libgit2/src/errors.c:8: libgit2/src/global.h:22:11: fatal error: 'openssl/ssl.h' file not found # include ^ 1 error generated. make: *** [libgit2/src/errors.o] Error 1 ERROR: compilation failed for package ‘git2r’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/git2r’ Warning in install.packages : installation of package ‘git2r’ had non-zero exit status ERROR: dependency ‘irlba’ is not available for package ‘igraph’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/igraph’ Warning in install.packages : installation of package ‘igraph’ had non-zero exit status ERROR: dependency ‘xml2’ is not available for package ‘rversions’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/rversions’ Warning in install.packages : installation of package ‘rversions’ had non-zero exit status ERROR: dependency ‘git2r’ is not available for package ‘devtools’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/devtools’ Warning in install.packages : installation of package ‘devtools’ had non-zero exit status ERROR: dependency ‘igraph’ is not available for package ‘lintr’ * removing ‘/Users/AmitTaneja/Library/R/3.3/library/lintr’ Warning in install.packages : installation of package ‘lintr’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/gg/8yb0vmfs74l4k8hb5xrw66mr0000gn/T/Rtmp4kbwiw/downloaded_packages’ ########################################### R version 3.3.2 (2016-10-31) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: OS X El Capitan 10.11.6 locale: [1] nl_NL.UTF-8/nl_NL.UTF-8/nl_NL.UTF-8/C/nl_NL.UTF-8/nl_NL.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] RevoUtils_10.0.2 tools_3.3.2 >

davidgohel / ReporteRs

unable to install ReporteRs on mac OS El Capitan #190