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dbeisser
/
Natrix2
Open-source bioinformatics pipeline for the preprocessing of raw amplicon sequencing / metabarcoding data.
MIT License
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2
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Question over indicating the location of the nt database
#26
smartise
opened
5 days ago
5
error in cluster_sorting
#25
dmgr90
closed
6 days ago
1
Error with example data
#24
gdunshea
closed
1 month ago
5
Medaka dependency issue
#23
theo-krueger
closed
2 months ago
3
Error in cluster sorting
#22
dmgr90
closed
1 month ago
4
updating natrix
#21
omarkr8
closed
3 months ago
1
custom_database
#20
dmgr90
closed
2 months ago
2
read counts throughout the pipeline
#19
omarkr8
closed
2 months ago
3
Error in rule quality_filtering:
#18
dmgr90
closed
4 months ago
3
Medaka taking suspiciously too long?
#17
omarkr8
closed
4 months ago
2
pychop error
#16
dmgr90
closed
5 months ago
3
Issue running Natrix2 with Nanopore data (dev-branch)
#15
MP-98-21
closed
2 months ago
10
vsearch_id parameter not provided
#14
willem-stock
closed
4 months ago
4
manually running each step
#13
omarkr8
closed
5 months ago
1
inconsistent OTU size value.
#12
omarkr8
closed
5 months ago
3
Issue running Natrix2 with Nanopore 18S example data
#11
MP-98-21
closed
5 months ago
3
Fixing potential issue with pychopper.
#10
keith-harrison
closed
7 months ago
3
pychopper on empty fastqs
#9
omarkr8
closed
7 months ago
6
Nanopore data
#8
Jorn-Bethke
closed
7 months ago
6
NCBI filtering
#7
omarkr8
closed
7 months ago
4
MultiQC error. RuntimeError: Click will abort further execution because Python was configured to use ASCII
#6
timyerg
closed
9 months ago
1
example data folder
#5
katfiishn
closed
7 months ago
14
Read correction error. Nanopore
#4
timyerg
closed
8 months ago
8
KeyError in line 2 of /Natrix2/rules/pychop.smk: 'pychopper'
#3
timyerg
closed
9 months ago
8
Dev
#2
adeep619
closed
1 year ago
0
miniconda libmamba fails(?)
#1
Andreas-Bio
closed
8 months ago
2