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dcouvin / CRISPRCasFinder

A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences
https://crisprcas.i2bc.paris-saclay.fr
GNU General Public License v3.0
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CRISPRCasFinder.pl did not report any errors but produced three unknown core files #50

Closed HZAU-YAYA closed 1 year ago

HZAU-YAYA commented 1 year ago

Hi These are my orders, CRISPRCasFinder.pl -in tt.fna -def General -cas -ccvr -ccc 50000 -gscf -keep -html -log -cpuM 8 -cpuP 8 --so sel392v2.so>tt.log. CRISPRCasFinder.pl did not report any errors but produced three unknown core files core.304026 core.304028 core.305136. I don't know what these files represent, are they normal output from the program Thanks

dcouvin commented 1 year ago

Hi @HZAU1702XBY, Thank you for your message. Did you try to run the program without ">tt.log" ? I think that this addition may generate the undesired files. If you use the last version of the program, the following option " -def General" is no more required. Hope this will work. Best regards, David

HZAU-YAYA commented 1 year ago

Hi David, Thanks for your answer, I deleted "-def Genera"l and "> tt.log". Program runs perfectly