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dcouvin / simpiTB

A pipeline for the analysis of whole genome sequences belonging to Mycobacterium tuberculosis complex
GNU General Public License v3.0
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simpiTB

A pipeline for the analysis of whole genome sequences belonging to Mycobacterium tuberculosis complex simipTB

Galaxy

A Galaxy wrapper has been developed to make the simpiTB tool more accessible. The tool is available at Galaxy KaruBioNet

Singularity

Use the following command to build the Singularity image from this current repository: sudo singularity build -F simpiTB.simg Singularity/simpiTB.def

or

sudo singularity config fakeroot --add <user>

singularity build -f simpiTB.simg Singularity/simpiTB.def