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PHANOTATE
PHANOTATE: a tool to annotate phage genomes.
GNU General Public License v3.0
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"parallel edges are forbidden" error in v1.6.4 but not in v1.5.1
#40
mtisza1
closed
6 months ago
2
fastpathz cannot traverse the network: TypeError: no path to target
#39
jmeppley
opened
7 months ago
2
Inquiry on upload
#38
songmj86
opened
9 months ago
1
Different outputs between 1.5.1 and 1.6.1. Also, odd hash symbols.
#37
raw937
opened
9 months ago
2
Update
#36
deprekate
closed
11 months ago
0
Update
#35
deprekate
closed
11 months ago
0
Protein Fasta format output (.faa)?
#34
raw937
opened
11 months ago
20
Fixed bug with missing chevrons for genes that extend off of genome
#33
deprekate
closed
1 year ago
0
Truncated proteins at genome end
#32
ilyavs
opened
1 year ago
1
Added support for aragorn
#31
deprekate
closed
1 year ago
0
Include Aragorn for tRNA masking in addition to tRNAscan-SE
#30
ilyavs
opened
1 year ago
5
multithreading
#29
b-tierney
closed
2 years ago
3
Adding a requirements.txt file to ease development
#28
linsalrob
closed
2 years ago
0
redirecting output of the gap regions.
#27
linsalrob
closed
2 years ago
0
Develop: incorrect output
#26
linsalrob
opened
2 years ago
0
Warning: tRNAscan not found, proceding without tRNA masking.
#25
noutin2020
closed
2 years ago
9
Add a zenodo id
#24
linsalrob
opened
3 years ago
0
Adding a requirements.txt file
#23
linsalrob
closed
2 years ago
1
missing phanotate_lastal_alignments.tgz
#22
tsp-kucbd
closed
3 years ago
1
Continuously increasing RAM demand
#21
thackl
opened
3 years ago
14
Adding hotfixes from the master branch to the develop branch
#20
deprekate
closed
3 years ago
0
Update README.md : dependencies
#19
vloux
closed
3 years ago
0
pip install failed
#18
liyangjie
closed
4 years ago
1
Adding a new version option (-v)
#17
linsalrob
closed
4 years ago
0
Can you create a release with the current version?
#16
telatin
closed
4 years ago
2
Develop
#15
deprekate
closed
4 years ago
0
Develop
#14
deprekate
closed
4 years ago
0
Develop
#13
deprekate
closed
4 years ago
0
Cutoff for phanotate score
#12
aponsero
closed
4 years ago
2
TypeError: a bytes-like object is required, not 'str'
#11
pck0
closed
4 years ago
4
Makefile error
#10
kshingler
closed
5 years ago
1
AttributeError: 'int' object has no attribute 'position'
#9
snayfach
closed
5 years ago
3
No ORFs for 38kb phage with 33 Prodigal genes
#8
snayfach
closed
5 years ago
17
Protein sequence from gene call
#7
snayfach
closed
5 years ago
11
suitable for metagenomic assemblies?
#6
guille0387
opened
5 years ago
1
How to use the output file .gb to assign functions to ORFs.
#5
manuss11
opened
5 years ago
3
Updating the validation code
#4
linsalrob
closed
5 years ago
0
Release Changes
#3
linsalrob
closed
5 years ago
0
Interpretation of results
#2
Handymanalan
opened
5 years ago
1
Working
#1
deprekate
closed
6 years ago
0