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dfsp-spirit
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fsbrain
R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.
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Error in rgl::open3d() : OpenGL is not available in this build
#55
xasapakos
opened
2 months ago
1
Add title to plots
#54
GerardYu
opened
10 months ago
1
Saving annotation to file
#53
iamjoostjanssen
opened
1 year ago
2
Error: rgl.viewpoint is depreciated
#52
cooperr11
closed
1 year ago
5
save output as grob objects
#51
GerardYu
opened
1 year ago
1
Tight layout with 9 view inflated
#50
mattsodoma
closed
1 year ago
8
9 view inflated surface
#49
mattsodoma
closed
1 year ago
1
Change rgl.* calls to *3d calls.
#48
dmurdoch
closed
1 year ago
1
MacOS support of fsbrain
#47
dfsp-spirit
closed
1 year ago
2
No figure output
#46
rb643
closed
1 year ago
20
No picture out after running "vis.subject.annot" code in Ubuntu 20.04
#45
Clancy-wu
closed
1 year ago
6
Support plotting on log scale
#44
dfsp-spirit
closed
1 year ago
1
better documentation structure
#43
dfsp-spirit
closed
1 year ago
0
Backup nitestdata on public, scientific repo
#42
dfsp-spirit
opened
1 year ago
1
Export directly
#41
mattsodoma
closed
1 year ago
5
visualising group difference maps
#40
MaLiUHH
opened
2 years ago
8
Render with R-shiny
#39
dipterix
opened
2 years ago
2
display p-values overlay
#38
knutj
opened
2 years ago
1
New fsbrain installation on M1 Mac does not show colorbar
#37
utooley
opened
2 years ago
3
datastructure returned by label.to.annot does not have 'fs.annot' class
#36
dfsp-spirit
closed
2 years ago
1
Inflated views intertwined
#35
signebray
closed
2 years ago
3
Error in setwd(dir) : cannot change working directory - while creating GIF movie using fsbrain locally
#34
XinQi7788
closed
2 years ago
1
Issues to create a GIF file using fsbrain docker image
#33
XinQi7788
closed
2 years ago
1
Is it possible to visualize the Surface and Volume at the same time?
#32
wjddyd66
closed
2 years ago
2
coloredmesh from Brain surface trimesh and values vector
#31
rcruces
closed
2 years ago
7
Snapshot at an angle?
#30
utooley
closed
3 years ago
3
I have a question about lh_region_value_list & rh_region_value_list
#29
wjddyd66
closed
3 years ago
5
annot.outline as a background
#28
AndrewLawrence
opened
3 years ago
3
Problem with basic visualization in tutorial
#27
gpdm94
closed
3 years ago
4
Getting error that the subject file is missing even though the subject file is present in the subjects directory.
#26
vaidehithakre21
closed
3 years ago
14
highlighting directly adjacent vertices fails with error
#25
dfsp-spirit
closed
3 years ago
1
Visualising volume data with surface boundaries
#24
sidchop
opened
3 years ago
3
Update coloredmesh.R
#23
zhenglukai
closed
3 years ago
2
Create fsbrain API cheat sheet
#22
dfsp-spirit
closed
2 years ago
1
Fix white stripes in custom background of images exported with vis.export.from.coloredmeshes
#21
dfsp-spirit
closed
3 years ago
1
makecmap_options 'range' return error and Additional view
#20
rcruces
closed
3 years ago
6
Min/Max setting in plotting
#19
rb643
closed
3 years ago
17
Problem with tutorial
#18
shima-jalalian
closed
3 years ago
3
Match the background vertices and results vertices
#17
icupsy
closed
3 years ago
6
Neuroconductor CI
#16
dfsp-spirit
closed
3 years ago
2
Make it easy to get additional brain atlases
#15
dfsp-spirit
closed
2 years ago
3
Multi-layer transparency
#14
dfsp-spirit
opened
4 years ago
0
Add custom lobe annotation to be able to use vis.region.values.on.subject with lobes
#13
dfsp-spirit
closed
3 years ago
1
Support writing subject metadata to separate MD file when saving cached data for groups
#12
dfsp-spirit
closed
3 years ago
2
fsaverage.path() should prefer FreeSurfer version over local download
#11
dfsp-spirit
closed
4 years ago
1
High-level interface to export publication quality figure with colorbar
#10
dfsp-spirit
closed
4 years ago
1
Support passing data for both hemispheres in a single vector to vis functions
#9
dfsp-spirit
closed
4 years ago
1
Support limiting the plotted data range
#8
dfsp-spirit
closed
4 years ago
1
Views other than t4 garbled for inflated and vis.x.on.subject
#7
utooley
closed
4 years ago
5
Symmetrical colorbars are drawn incorrectly
#6
dfsp-spirit
closed
4 years ago
2
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