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dib-lab
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2020-workflows-paper
Strategies for leveraging workflow systems to streamline large-scale biological analyses
https://dib-lab.github.io/2020-workflows-paper
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upd from rootstock to fix manubot building; upd doi link
#62
bluegenes
closed
3 years ago
0
Manubot upgrade required to fix broken builds
#61
dhimmel
opened
3 years ago
0
add sequencing data to abstract
#60
bluegenes
closed
3 years ago
0
we don't actually say sequencing data in the abstract
#59
taylorreiter
closed
3 years ago
0
Review edits
#58
bluegenes
closed
3 years ago
0
Update 05.project-management.md
#57
rmzelle
closed
3 years ago
0
article: Responsible, practical genomic data sharing that accelerates research
#56
bluegenes
opened
3 years ago
0
add biorxiv link to README
#55
ctb
closed
3 years ago
0
add kallisto ref
#54
bluegenes
closed
4 years ago
0
update WDL/CWL language
#53
ctb
closed
4 years ago
0
Add Charles Reid to authors metadata
#52
charlesreid1
closed
4 years ago
0
less whitespace vc fig
#51
bluegenes
closed
4 years ago
0
merge in upstream manubot rootstock changes
#50
bluegenes
closed
4 years ago
0
specify co-equal contributions
#49
bluegenes
closed
4 years ago
0
add updated multiqc figure
#48
shannonekj
closed
4 years ago
0
Update checksum for proper rendering
#47
shannonekj
closed
4 years ago
0
Update to figures
#46
shannonekj
closed
4 years ago
0
Add name to metadata.yml
#45
brooksph
closed
4 years ago
0
add author contrib; more acknowledgements
#44
bluegenes
closed
4 years ago
0
add radseq and wgs euk cits in tab
#43
taylorreiter
closed
4 years ago
0
fix remaining broken citations
#42
bluegenes
closed
4 years ago
0
try to fix failing citations
#41
taylorreiter
closed
4 years ago
0
upd compute resources table
#40
bluegenes
closed
4 years ago
1
replace dag fig with rnaseq quant workflow
#39
taylorreiter
closed
4 years ago
0
finish figure updates
#38
bluegenes
closed
3 years ago
0
updated figures
#37
shannonekj
closed
4 years ago
2
advice about Rabix/Terra is ungrounded and not helpful
#36
mr-c
closed
4 years ago
0
CWL is not interchangeable with WDL
#35
mr-c
closed
4 years ago
3
Address ctb comments in #25
#34
bluegenes
closed
4 years ago
0
add to sketching, workflow table caption
#33
bluegenes
closed
4 years ago
0
reorder workflow figure and caption
#32
bluegenes
closed
4 years ago
1
multiQC figure
#31
shannonekj
closed
4 years ago
6
Suggested edits 2020 06 04
#30
shannonekj
closed
4 years ago
0
Round 2 Comments
#29
shannonekj
closed
4 years ago
8
added shannon metadata
#28
shannonekj
closed
4 years ago
2
Add Luiz
#27
luizirber
closed
4 years ago
0
Link: Developing a modern data workflow for evolving data
#26
bluegenes
closed
3 years ago
0
Additional items from ctb comments 5/28
#25
bluegenes
opened
4 years ago
0
Change spacegraphcats DOI to genome biology
#24
taylorreiter
closed
3 years ago
2
many minor edits and revision suggestions
#23
ctb
closed
4 years ago
1
try fix broken citations
#22
taylorreiter
closed
4 years ago
0
Citations
#21
taylorreiter
closed
4 years ago
0
adjust spacing png
#20
taylorreiter
closed
4 years ago
0
adjust spacing
#19
taylorreiter
closed
4 years ago
0
Yet Another Rework PR
#16
bluegenes
closed
4 years ago
0
Rework trouble shooting section
#15
taylorreiter
closed
4 years ago
0
rework intro, troubleshooting sections
#14
bluegenes
closed
4 years ago
1
add more background in intro
#13
taylorreiter
closed
4 years ago
0
address some remaining text issues
#12
taylorreiter
closed
4 years ago
0
things to address from PR #10
#11
taylorreiter
closed
4 years ago
2
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