DIB Lab Metagenomics Rotation Project

Welcome to the project home for our DIB-lab rotation materials! The training website contains a much prettier (rendered) version of these materials - check it out!

The material in this repository covers a metagenomics workflow. It incorporates bioinformatics skills like unix, documenting workflows, and using a remote computer. It covers the use of tools like sourmash and spacegraphcats.

The material in this repository is adapted from the following sources:

• ANGUS: https://angus.readthedocs.io/en/2019/index.html
• HPC Carpentry: https://hpc-carpentry.github.io/
• Data Carpentry Genomics: https://datacarpentry.org/genomics-workshop/