Open pfey03 opened 4 years ago
All link problems are endemic., I show examples
AmiGO link broken on GO pages: http://dictybase.org/ontology/go/0004381/annotation/page/1 Correct link: http://amigo.geneontology.org/amigo/term/GO:0035250
Gene agtA http://dictybase.org/gene/DDB_G0283005
EC links EC: 2.4.1.37 links currently to strange default: https://www.qmul.ac.uk/undergraduate/coursefinder/courses/2020/chemistry// Correct link: https://www.brenda-enzymes.org/enzyme.php?ecno=2.4.1.37 Link to Brenda is much more informative than EC in Expasy, also GO meeting stated that should be used. We should link to Brenda.
dictyExpress dictyExpress leads currently an ERROR Correct link: https://dictyexpress.research.bcm.edu/ not gene specific Not sure about gene specific links. When I enter agtA for example, I get a super long link.
Gene fpaA (an enzyme, has several different links) http://dictybase.org/gene/DDB_G0269230
Inparanoid doesn't find results: http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=DDB_G0269230 Not sure we still link out to Inparanoid as we need to redo all orthologies?
All link problems are endemic., I show examples
AmiGO link broken on GO pages: http://dictybase.org/ontology/go/0004381/annotation/page/1 Correct link: http://amigo.geneontology.org/amigo/term/GO:0035250
Gene agtA http://dictybase.org/gene/DDB_G0283005
EC links EC: 2.4.1.37 links currently to strange default: https://www.qmul.ac.uk/undergraduate/coursefinder/courses/2020/chemistry// Correct link: https://www.brenda-enzymes.org/enzyme.php?ecno=2.4.1.37 Link to Brenda is much more informative than EC in Expasy, also GO meeting stated that should be used. We should link to Brenda.
dictyExpress dictyExpress leads currently an ERROR Correct link: https://dictyexpress.research.bcm.edu/ not gene specific Not sure about gene specific links. When I enter agtA for example, I get a super long link.
Gene fpaA (an enzyme, has several different links) http://dictybase.org/gene/DDB_G0269230
Inparanoid doesn't find results: http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=DDB_G0269230 Not sure we still link out to Inparanoid as we need to redo all orthologies?