dictyBase / migration-data

Data files required for migration
MIT License
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Add plasmid keywords via upload #52

Closed pfey03 closed 2 years ago

pfey03 commented 2 years ago

Skip this section if it's not ontology(obo) files

:atom: :electron: :atom: :electron: :basecampy: :basecamp:

Pull request for editing ontology(obo) files

That's all. :neckbeard: :neckbeard: :neckbeard: :trollface: :trollface:

pfey03 commented 2 years ago

added definition to all terms

github-actions[bot] commented 2 years ago

:x: :x: Ontology errors :x: :x:

File: dicty_plasmid_keywords.obo

:boom:Violations:boom:

  • duplicate definition

Full report

Level Rule Name Subject Property Value
ERROR duplicate_definition obo:DDPLASMIDKEY_0000021 IAO:0000115 The tetON / tetOFF mechanism, provides an inducible expression system.
ERROR duplicate_definition obo:DDPLASMIDKEY_0000050 IAO:0000115 The tetON / tetOFF mechanism, provides an inducible expression system.
ERROR duplicate_definition obo:DDPLASMIDKEY_0000051 IAO:0000115 The doxON / doxOFF mechanism, provides an inducible expression system.
ERROR duplicate_definition obo:DDPLASMIDKEY_0000052 IAO:0000115 The doxON / doxOFF mechanism, provides an inducible expression system.
WARN missing_definition obo:DDPLASMIDKEY_0000046 IAO:0000115
WARN missing_definition IAO:0000115 IAO:0000115
WARN missing_definition oboInOwl:hasBroadSynonym IAO:0000115
WARN missing_definition oboInOwl:hasDbXref IAO:0000115
WARN missing_definition oboInOwl:hasExactSynonym IAO:0000115
WARN missing_definition oboInOwl:hasOBOFormatVersion IAO:0000115
WARN missing_definition oboInOwl:hasOBONamespace IAO:0000115
WARN missing_definition oboInOwl:hasRelatedSynonym IAO:0000115
INFO missing_superclass obo:DDPLASMIDKEY_0000001 rdfs:subClassOf
pfey03 commented 2 years ago

Oh why not using the same def. Will fix it but is rather difficult as those belong together. Will do tomorrow.