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digitalcytometry / ecotyper

EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
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problems in tutorial 1 #30

Closed lzz-123 closed 1 year ago

lzz-123 commented 2 years ago

Hi,

When using the "bulk_lung_data. txt" to run "recovery", we select "Carcinoma", there is an error: "Error in read.table(file = file, header = header, sep = sep, quote = quote, : no lines available in input " No error occurred when we run "recovery" using "bulk_lymphoma_data. txt"

Best.

BALuca commented 2 years ago

Hi,

We have not been able to reproduce the behavior. Can you please indicate the command line used?

Best, The EcoTyper team