step4 error

[sayhello854123]

Step 4 (extracting cell state information)... Extracting cell states information for: Dendritic Extracting cell states information for: M1.macrophage Extracting cell states information for: M2.macrophage Extracting cell states information for: Monocyte Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to array extent Calls: rownames<- -> rownames<- Execution halted Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to array extent Calls: rownames<- -> rownames<- Execution halted Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to array extent Calls: rownames<- -> rownames<- Execution halted Error in RunJobQueue() : EcoTyper failed. Please check the error message above! Execution halted

[BALuca]

Hello, Apologize for the issue you are encountering. Would it be possible to send us a reproducible example at ecotyper.stanford@gmail.com for debug? Best, The EcoTyper team

[sayhello854123]

Thank you for letting me know that you have resolved the issue. I'm glad I could assist. If you have any further questions or need help in the future, feel free to reach out. Have a great day!

BALuca @.***> 于2023年6月29日周四 21:55写道：

Hello, Apologize for the issue you are encountering. Would it be possible to send us a reproducible example at @.*** for debug? Best, The EcoTyper team

— Reply to this email directly, view it on GitHub https://github.com/digitalcytometry/ecotyper/issues/68#issuecomment-1613228169, or unsubscribe https://github.com/notifications/unsubscribe-auth/AMVABDIAZGC22KJB5HEH5RTXNWCOVANCNFSM6AAAAAAZIYO5EU . You are receiving this because you authored the thread.Message ID: @.***>

[sayhello854123]

Thank you for letting me know that you have resolved the issue. I'm glad I could assist. If you have any further questions or need help in the future, feel free to reach out. Have a great day!

chuichui wang @.***> 于2023年7月6日周四 17:04写道：

Thank you for letting me know that you have resolved the issue. I'm glad I could assist. If you have any further questions or need help in the future, feel free to reach out. Have a great day!

BALuca @.***> 于2023年6月29日周四 21:55写道：

Hello, Apologize for the issue you are encountering. Would it be possible to send us a reproducible example at @.*** for debug? Best, The EcoTyper team

— Reply to this email directly, view it on GitHub https://github.com/digitalcytometry/ecotyper/issues/68#issuecomment-1613228169, or unsubscribe https://github.com/notifications/unsubscribe-auth/AMVABDIAZGC22KJB5HEH5RTXNWCOVANCNFSM6AAAAAAZIYO5EU . You are receiving this because you authored the thread.Message ID: @.***>

[sayhello854123]

Thank you for reaching out. I wanted to inform you that I have successfully resolved the issue I was facing. Your letter was greatly appreciated and I would like to express my gratitude for your support.

BALuca @.***> 于2023年6月29日周四 21:55写道：

Hello, Apologize for the issue you are encountering. Would it be possible to send us a reproducible example at @.*** for debug? Best, The EcoTyper team

— Reply to this email directly, view it on GitHub https://github.com/digitalcytometry/ecotyper/issues/68#issuecomment-1613228169, or unsubscribe https://github.com/notifications/unsubscribe-auth/AMVABDIAZGC22KJB5HEH5RTXNWCOVANCNFSM6AAAAAAZIYO5EU . You are receiving this because you authored the thread.Message ID: @.***>

[sayhello854123]

Tutorial 4 https://github.com/digitalcytometry/ecotyper#tutorial-4-de-novo-discovery-of-cell-states-and-ecotypes-in-bulk-data: I have an account, but I don't know how to obtain a token.

chuichui wang @.***> 于2023年7月6日周四 17:07写道：

Thank you for reaching out. I wanted to inform you that I have successfully resolved the issue I was facing. Your letter was greatly appreciated and I would like to express my gratitude for your support.

BALuca @.***> 于2023年6月29日周四 21:55写道：

Hello, Apologize for the issue you are encountering. Would it be possible to send us a reproducible example at @.*** for debug? Best, The EcoTyper team

— Reply to this email directly, view it on GitHub https://github.com/digitalcytometry/ecotyper/issues/68#issuecomment-1613228169, or unsubscribe https://github.com/notifications/unsubscribe-auth/AMVABDIAZGC22KJB5HEH5RTXNWCOVANCNFSM6AAAAAAZIYO5EU . You are receiving this because you authored the thread.Message ID: @.***>

[BALuca]

Hi, You can obtain a token from the CIBERSORTx website: https://cibersortx.stanford.edu/ Best, The EcoTyper team