wdp-ds

Cancel changesData Science For The Wild Dolphin Project

This is a collection of scripts to build and analyze dolphin communication models and communicate the results with domain experts.

History

• The models from IJCNN20, December 2019 are here.
• The version with DTW + HMMs is here, June 2020
• The HTK version of the Conv LSTM HMM Hybrid is here, Aug 2021
• The version that also includes a lot of evaluastion and training here Sep 2021

Contents

• 1) lib_dolphin: Training and Evaluation of Machine Learning Models
• 2) pipeline.py: Run this to build a model
• 3) decoder_worker.py: Implement everything abotu decoding audio files
• 4) app.py: Web server visualizing the results
• 5) notebooks: Some experimental notebooks
• 6) templates: HTML templates for webapp
• 7) dtw_index: dtw index server in c++
• 8) dolphin_mnist: java program to label audio data

Dependencies for python

• sklearn
• tensorflow 2.0
• numpy / scipy
• numba
• matplotlib
• htk
• kneed
• fastavro
• redis
• flask
• flask-login
• polling