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dms-vep
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SARS-CoV-2_XBB.1.5_spike_DMS
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Adjust summary heatmap scale
#35
Bernadetadad
closed
1 year ago
0
is ceiling too high on summary plot of ACE2 affinity?
#34
jbloom
closed
1 year ago
2
finalize simple corrs of DMS with growth
#33
jbloom
closed
1 year ago
0
Revert "add simple correlations of DMS phenotypes versus clade growth"
#32
jbloom
closed
1 year ago
0
add simple correlations of DMS phenotypes versus clade growth
#31
jbloom
closed
1 year ago
0
A plot to highlight sites outside RBD that increase affinity and are/have been present in major variants
#30
Bernadetadad
closed
1 year ago
1
add comparison of clade growth to DMS in `compare_natural`
#29
jbloom
closed
1 year ago
0
Default pre-set parameter values
#28
Bernadetadad
closed
1 year ago
4
integrate comparison with natural sequences into pipeline
#27
jbloom
closed
1 year ago
0
fix tooltips in `affinity_escape_corr`
#26
jbloom
closed
1 year ago
0
Mutations not displaying correctly
#25
Bernadetadad
closed
1 year ago
1
compare spike vs RBD scans
#24
jbloom
closed
1 year ago
0
add comparison of escape in high and medium ACE2 cells
#23
jbloom
closed
1 year ago
0
analysis of ACE2 affinities across datasets and correlations
#22
jbloom
closed
1 year ago
1
update summary plot legend to specify XBB sera used
#21
jbloom
closed
1 year ago
0
update `dms-vep-pipeline-3` to 3.4.0 to show new summary plots made by new rules
#20
jbloom
closed
1 year ago
0
updated integrated summary
#19
jbloom
closed
1 year ago
0
update pipeline to 3.2.3 and clean up docs
#18
jbloom
closed
1 year ago
0
Correlations between high and medium cells
#17
Bernadetadad
closed
1 year ago
1
Summary plot
#16
Bernadetadad
closed
1 year ago
1
Should we use different icXX for sera
#15
Bernadetadad
closed
1 year ago
2
fix receptor affinity display
#14
Bernadetadad
closed
1 year ago
0
show receptor affinity and better sliders via `dms-vep-pipeline-3`
#13
jbloom
closed
1 year ago
2
delete old pipeline
#12
Bernadetadad
closed
1 year ago
0
github pages not updating
#11
Bernadetadad
closed
1 year ago
2
Add new sera 050823
#10
Bernadetadad
closed
1 year ago
0
Add spatial distances
#9
Bernadetadad
closed
1 year ago
0
Averaging serum elections
#8
Bernadetadad
closed
1 year ago
2
fix plotting
#7
Bernadetadad
closed
1 year ago
0
edit gitmodules
#6
Bernadetadad
closed
1 year ago
0
refactor for dms-vep-3 pipeline
#5
Bernadetadad
closed
1 year ago
1
sera mapping
#4
Bernadetadad
closed
1 year ago
0
Sera test selection 300623
#3
Bernadetadad
closed
1 year ago
0
update
#2
Bernadetadad
closed
1 year ago
0
run pipeline
#1
Bernadetadad
closed
1 year ago
0
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