donia-lab MetaBGC issues

donia-lab / MetaBGC

A metagenomic strategy for harnessing the chemical repertoire of the human microbiome

GNU General Public License v3.0

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issues

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Input files unclear

#23 susheelbhanu closed 3 years ago
4
Reproducing LanC spHMMs.

#22 Manoo-hao opened 3 years ago
7
handling F1 n.d. values and adapting build plots accordingly

#21 Manoo-hao closed 3 years ago
0
metabgc search suddenly stops

#20 aimirza opened 3 years ago
1
Example input files for new modules

#19 Manoo-hao opened 3 years ago
0
Does MetaBGC make interleaved reads from split reads?

#18 aimirza opened 3 years ago
0
Search does not run Quantify and Cluster

#17 aimirza closed 3 years ago
4
identified-biosynthetic-reads.fasta is empty

#16 aimirza closed 3 years ago
2
TOY dataset not downloadable

#15 aimirza closed 3 years ago
1
Ensure biopython version is less than 1.78 which removes alphabet

#14 andre-geldenhuis closed 4 years ago
0
Issue with metabgc build failing

#13 kellystyles closed 3 years ago
9
update

#12 Junyu25 closed 4 years ago
0
When will the Bioconda implementation be released?

#11 jacorwin closed 4 years ago
1
Input file

#10 utpalmtbi closed 4 years ago
11
StatisticsError after cd-hit step

#9 tamburinif closed 4 years ago
7
Toy input files for build operation

#8 deucy646 closed 4 years ago
4
Toy build for MetaBGC v1.3.3

#7 deucy646 closed 4 years ago
2
Isolating input files and different spHMMs provided?

#6 Manoo-hao closed 4 years ago
7
prot_seq_directory flag required?

#5 Manoo-hao closed 4 years ago
4
Single element tuple need to add a comma

#4 alienzj closed 4 years ago
1
codon table

#3 alienzj closed 4 years ago
1
fix syntax error

#2 alienzj closed 4 years ago
1
BGCs abundance profile

#1 alienzj closed 4 years ago
2