dphansti mango issues - Githubissues

dphansti / mango

chia pet analysis software

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issues

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Error in library("mango") : there is no package called 'mango'

#27 bioinfo89 closed 2 years ago
0
is mango can be used to HIC data?

#26 JiaoLaboratory opened 2 years ago
0
Is there any solution for multi threads now?

#25 wangjk321 opened 3 years ago
0
Error in data.frame(chr1 = rep(chrom, curlength), start1 = start1[1:curlength], : arguments imply differing number of rows: 0, 1 Calls: makecombos -> data.frame

#24 sillysean opened 3 years ago
2
Error : read names of PET ends do not match[1] "removing duplicate PETs"

#23 ag-abhishek opened 3 years ago
1
Error in density.default(log10distances)

#22 MamushChu closed 5 years ago
1
hic (hi-chip) data loop calling with mango

#21 JungWoongJae opened 5 years ago
6
MACS2 Failing to produce a good amount peaks, causing failure at stage 5

#20 RJPNewell opened 6 years ago
0
Error in seq.default

#19 jing-wan opened 7 years ago
6
Handle gzipped FASTQs

#18 rakarnik closed 7 years ago
2
Fix to distance calculation actually breaks pipeline

#17 pjmichalski opened 7 years ago
1
how can mango build bedpe according to line-by-line matching from sam files of uniquely mapped reads

#16 hanbinlu closed 8 years ago
1
more useful error messages

#15 Lila14 closed 5 years ago
0
Bowtie2?

#14 Lila14 opened 8 years ago
1
Mango fails at Stage 4 - bedtools merge not accepting piped unspecified stdin

#13 iwanttobeabadger opened 8 years ago
1
numberlinkers argument not passed

#12 UBrau closed 8 years ago
3
Inconsistency between code and documentation

#11 pjmichalski closed 8 years ago
1
Calls: makecombos -> data.frame error

#10 hanbinlu closed 8 years ago
3
Macs2 shiftsize is depreciated

#9 pjmichalski opened 8 years ago
1
Getting error in stage 5 of pipeline in smooth.spline function.

#8 mohammedmsk opened 8 years ago
7
Step 3 fails with no bedpe file written; "Read names of PET ends do not match."

#7 mchimenti closed 8 years ago
5
Nothing is written on the peaksfileslop

#6 chadi-elfarran closed 8 years ago
6
Allow a "--threads" flag for step 2 bowtie?

#5 mchimenti closed 8 years ago
1
"object gsize not found" in mango.R"

#4 KojiMasuda closed 8 years ago
1
implement intersectBed

#3 dphansti closed 9 years ago
0
get macs2 installed on OSX 10.9

#2 dphansti closed 9 years ago
0
implement external sorting to sort large file

#1 dphansti closed 9 years ago
0