FATAL: Kernel too old - Githubissues

duncanca / mosaik-aligner

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FATAL: Kernel too old #1

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago

What steps will reproduce the problem?
Just executing any of the binaries is all.

What is the expected output? What do you see instead? For example:
% ./MosaikAligner 
FATAL: kernel too old
Segmentation fault

What version of the product are you using? On what operating system?
Mosaik 1.0.1307 Distribution Documentation
Michael Stromberg, Marth Lab                                         
2009-10-14

Please provide any additional information below.
Hi Michael, I gave both the x64 and the x86 a try on my machine but they
both segfaulted. Maybe this is useful:

% uname -a
Linux genomics1 2.6.9-78.0.1.ELlargesmp #1 SMP Tue Jul 22 18:11:13 EDT 2008
x86_64 x86_64 x86_64 GNU/Linux

Sorry to have the first thing I discovered to be an issue, probably with my
own machine!

Thanks-
Brian

Original issue reported on code.google.com by des...@gmail.com on 15 Oct 2009 at 4:15

GoogleCodeExporter commented 9 years ago

Kernel too old simply means that kernel/glibc version on your machine is much 
older
than the machine that was used to create the binaries. 

Your best bet in this case is to download the source code, enter the src 
directory
and type "make; make utils" to make sure everything works well on your machine.
MOSAIK compiles without warning or errors as long as you have a relatively 
recent g++
(gcc) compiler. g++ 4.2 and later should be fine.

Original comment by snowneb...@gmail.com on 16 Oct 2009 at 2:52

GoogleCodeExporter commented 9 years ago

[deleted comment]

GoogleCodeExporter commented 9 years ago

[deleted comment]

GoogleCodeExporter commented 9 years ago

I had to go to another machine to find a g++ that new, but luckily the 
resulting binaries do work back on the 
original machine, which I'm stuck with... thanks for the solution.

Original comment by des...@gmail.com on 16 Oct 2009 at 2:45

GoogleCodeExporter commented 9 years ago

Awesome! Let me know if you find anything else.

Original comment by snowneb...@gmail.com on 16 Oct 2009 at 2:48

Changed state: Verified

GoogleCodeExporter commented 9 years ago

Issue 22 has been merged into this issue.

Original comment by snowneb...@gmail.com on 16 Jan 2010 at 1:51