EANBiT 2019 Residential Training Mini-Projects

Mini-projects for the residential training. As part of the EANBiT Residential training 2019, you will collaboratively work on mini-projects in groups of four.

Projects

1. Microbiome of two predominant seagrass species of the Kenyan coast, Enhalus acoroides and Thalassodendron ciliatum
2. Microbiome metagenomics analysis of Kilifi creek mangrove sediments
3. Reproduce genomic analysis
4. Variant Calling Workflow Pipeline
5. A project on whole-genome assembly, annotation and phylogenetic analysis

Expected

• Work collaboratively on the project. In your report, you need to state the role played by each group member.
• Assign tasks to group members using GitHub issues and learn from each other. Every member of the group must be knowledgeable of the work of the whole group.
• Comment your scripts in a nice and informative way. Your scripts, programs, workflows, etc, will be reviewed as a critical part of the project assessment.
• Your writeup should be complete with visualizations.
• Collaborate via Git & GitHub, making use of the Git Workflow.