Python package to handle the complete pipeline and APIs relative to emikg graph
This set of scripts integrates part of the previously developped enpkg_full pipeline. These script are designed to convert metabolomics datasets to Linked Open Data format. See more details at https://doi.org/10.26434/chemrxiv-2023-sljbt-v2.
An instance of the emikg web interface is availbale for demo purposes at https://kg.earthmetabolome.org.
Disclaimer: this is work in progress and will likely not work if your dataset to be treated is not formatted in the exact same way as the example datset. Do feel free to ping us in the https://github.com/earth-metabolome-initiative/emikg/issues if you have questions or suggestions.