Open AleksZakirov opened 2 years ago
Hi Aleks,
This is a documented issue with an older version of the GEOquery package, which we are using. A discussion of the issue here: https://support.bioconductor.org/p/9140952/
This version of GEOquery reads the data using readr::read_table(), which relies on vroom. This error occurs when the data exceeds the default buffer size for vroom (131072 b).
We have implemented a fix in the newest online version of easyGEO by increasing the buffer size for larger datasets.
Please let us know if you run into more issues.
Judith
Hi! First of all, thank you very much for developing this wonderful tool!
Unfortunately, I have a recurrent issue appearing at random and lasting for prolonged periods of time. Sometimes, when I access the easyGEO page, after submitting a GSE accession number of interest, then selecting the platform and clicking the "Select to proceed" button, I get the following error message:
I tried refreshing the page, clearing cookies, using incognito mode, using a different browser, all without success. This makes me believe the issue has something to do with the server side.
The issue seems to creep up more or less randomly - sometimes everything works fine, and sometimes it keeps throwing this message.