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ebi-ait
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hca-to-scea-tools
Helpers and tools to assist in the conversion of HCA datasets into SCEA
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Updated test_hca2scea.py
#53
ami-day
closed
3 years ago
3
Updated script
#52
ami-day
closed
3 years ago
0
Bump axios from 0.19.2 to 0.21.2 in /hca2scea-frontend
#51
dependabot[bot]
closed
2 years ago
2
Bump color-string from 1.5.3 to 1.6.0 in /hca2scea-frontend
#50
dependabot[bot]
closed
2 years ago
2
characteristic tests dcp-470
#49
amnonkhen
closed
3 years ago
0
Bump path-parse from 1.0.6 to 1.0.7 in /hca2scea-frontend
#48
dependabot[bot]
closed
2 years ago
2
Update sop
#47
ami-day
closed
3 years ago
0
Bump xlsx from 0.15.6 to 0.17.0 in /hca2scea-backend
#46
dependabot[bot]
closed
2 years ago
2
Bump postcss from 7.0.27 to 7.0.36 in /hca2scea-frontend
#45
dependabot[bot]
closed
2 years ago
2
Bump glob-parent from 5.1.0 to 5.1.2 in /hca2scea-backend
#44
dependabot[bot]
closed
2 years ago
2
Bump browserslist from 4.8.7 to 4.16.6 in /hca2scea-frontend
#43
dependabot[bot]
closed
2 years ago
2
Updated the readme
#42
Wkt8
closed
3 years ago
0
Bump hosted-git-info from 2.8.5 to 2.8.9 in /hca2scea-frontend
#41
dependabot[bot]
closed
2 years ago
2
Bump lodash from 4.17.15 to 4.17.21 in /hca2scea-frontend
#40
dependabot[bot]
closed
2 years ago
2
Bump ua-parser-js from 0.7.21 to 0.7.28 in /hca2scea-frontend
#39
dependabot[bot]
closed
2 years ago
2
Feature/code cleanup: updates to test
#38
ami-day
closed
3 years ago
2
Support spreadsheets with multiple specimen ids per donor id
#37
ami-day
closed
3 years ago
1
Bump y18n from 3.2.1 to 3.2.2 in /hca2scea-frontend
#36
dependabot[bot]
closed
2 years ago
2
Some projects give errors. Investigate these and resolve them.
#35
ami-day
closed
3 years ago
1
Get sequence file paths
#34
ami-day
closed
3 years ago
0
Update name options
#33
ami-day
closed
3 years ago
0
Update UUID argument
#32
ami-day
closed
3 years ago
0
Reformatted the age range to remove '-' character
#31
ami-day
closed
3 years ago
0
Reformat technology
#30
ami-day
closed
3 years ago
0
Mismatches in fields when running from contributor spreadsheet
#29
mshadbolt
closed
3 years ago
1
Have an optional `output path` argument
#28
mshadbolt
closed
3 years ago
1
help text for `-id` argument inconsistent
#27
mshadbolt
closed
3 years ago
1
Added new technology options
#26
ami-day
closed
3 years ago
0
added engine as openpyxl
#25
yusra-haider
closed
3 years ago
0
Hca to scea tool: add ability to curate enrichment protocol
#24
ami-day
closed
3 years ago
1
Conversion hangs after clicking on 'Process' on web interface
#23
rays22
closed
3 years ago
29
Added new technology type options and edited the relevant fields
#22
ami-day
closed
3 years ago
0
Automated the updates to the project_details.json file
#21
ami-day
closed
3 years ago
1
Added new fields to idf
#20
ami-day
closed
3 years ago
3
Bump dot-prop from 4.2.0 to 4.2.1 in /hca2scea-backend
#19
dependabot[bot]
closed
2 years ago
2
Be able to run tool as script
#18
yusra-haider
closed
3 years ago
0
Replace nan’s in the idf file with ‘’ and addition of person role ontologies and keep just ‘submitter’ or ‘curator’ in idf file
#17
ami-day
closed
3 years ago
1
Add ability to get all secondary accessions from the spreadsheet
#16
ami-day
closed
3 years ago
2
Ability to get full file paths for file names. Also include an initial check and exit if file paths cannot be found.
#15
ami-day
closed
3 years ago
1
Ability to check which E-HCAD-ids are in the tracker already and suggest the next id (still allowing for editing)
#14
ami-day
closed
3 years ago
2
Add ability to get hca submission id from the project in ingest prod. and also get the last update date for the project
#13
ami-day
closed
3 years ago
1
Change the default values in the tick boxes and add new tick boxes (fields)
#12
ami-day
closed
3 years ago
1
Ability to edit protocol id and name in the protocol boxes that already appear (and any additional added)
#11
ami-day
closed
3 years ago
1
Add ability to add and delete new protocol boxes and type inside them
#10
ami-day
closed
3 years ago
1
Bump axios from 0.19.2 to 0.21.1 in /hca2scea-frontend
#9
dependabot[bot]
closed
3 years ago
1
Bump ini from 1.3.5 to 1.3.8 in /hca2scea-backend
#8
dependabot[bot]
closed
2 years ago
3
Add support for non-10xV2 technologies and the different 10X technology versions
#7
ESapenaVentura
closed
3 years ago
2
Support multiple versions of the same technology
#6
ESapenaVentura
closed
3 years ago
1
Support metadata extraction from Ingest by uuid
#5
ESapenaVentura
closed
3 years ago
0
Support automatic filling of properties for all 10x chemistries + SS2
#4
ESapenaVentura
closed
3 years ago
0
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