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ecaruyer
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phantomas
Create realistic digital phantoms in diffusion MRI.
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Changed np.int into python's builtin
#51
ecaruyer
closed
1 year ago
0
BF: changed np.bool and np.int to python's builtins
#50
ecaruyer
closed
1 year ago
0
BF: corrected type in reading volume fraction of free-water isotropic…
#49
ecaruyer
closed
2 years ago
0
volume_fraction bug
#48
DiCIPHR-Lab
closed
2 years ago
1
BF: changed the fibers mask so that it ends at the boundary of the ph…
#47
ecaruyer
closed
2 years ago
0
b-tensors
#46
cbocquillon
closed
2 years ago
1
Qnorm bval
#45
cbocquillon
closed
2 years ago
0
BF: error in axis when summing in spherical_regions_volume_fraction
#44
ecaruyer
closed
2 years ago
0
clean code
#43
cbocquillon
closed
2 years ago
1
Partial volume free water
#42
ecaruyer
closed
2 years ago
0
Move to python3
#41
ecaruyer
closed
5 years ago
0
python 3 partial support
#40
samuelstjean
closed
5 years ago
0
BF: Removed deprecated use of the scipy.interpolate.PiecewisePolynomial class
#39
ecaruyer
closed
7 years ago
0
Scipy 0.18 produces a ValueError
#38
samuelstjean
closed
7 years ago
3
fix typo in scikits.sparse
#37
samuelstjean
closed
7 years ago
1
[ENH] Replace distutils with setuptools
#36
oesteban
closed
7 years ago
1
BF: Changed affine matrix so that the field of view is now a multiple…
#35
ecaruyer
closed
8 years ago
0
BF: Indexing for sqrt(2) SH scalling
#34
mpaquette
closed
8 years ago
1
BF: vtk 6+ bug with SetInput
#33
mpaquette
closed
8 years ago
1
more readable readme + requirements.txt (for pip install) + help with a dependency issue (ubuntu 14.04)
#32
alvaroabascar
closed
8 years ago
1
A possible fix for #28
#31
oesteban
closed
8 years ago
0
Skip fiber-geometry model when simulating DWIs
#30
oesteban
closed
8 years ago
4
Skip fiber-geometry model
#29
oesteban
closed
9 years ago
6
ImportError: No module named fast_volume_fraction
#28
sbaete
opened
10 years ago
23
Bundles can't pass through csf
#27
samuelstjean
opened
10 years ago
0
BF: VTK issue with SetInputData.
#26
ecaruyer
closed
10 years ago
1
Added additional input arguments
#25
gabknight
closed
10 years ago
4
Adjust SNR to WM B0 value
#24
gabknight
closed
10 years ago
1
phantomas_view is broken
#23
gabknight
closed
7 years ago
2
empty or flat diffusion-weighted images
#22
mdesco
opened
10 years ago
1
More crossings: 2-way and 3-way crossings
#21
mdesco
closed
10 years ago
2
BF: removed 1/(4*pi) factor for fod computation
#20
gabknight
closed
10 years ago
1
Added export vf option
#19
samuelstjean
closed
10 years ago
1
Revert to non SH-based fods (SH fods need bug fixing and optimization).
#18
ecaruyer
closed
10 years ago
3
Add new phantoms
#17
gabknight
closed
10 years ago
4
Added export_vf option
#16
samuelstjean
closed
10 years ago
3
Create fod pure sh
#15
ecaruyer
closed
10 years ago
0
Compute fod dipy mrtrix
#14
ecaruyer
closed
10 years ago
0
Minor changes
#13
ecaruyer
closed
10 years ago
0
Fix bundle geometry in examples/isbi_challenge_2013.txt so that all bund...
#12
ecaruyer
closed
10 years ago
0
Added a fallback to phantomas_view when no volume fraction is provided f...
#11
ecaruyer
closed
10 years ago
0
Fix bundle masks
#10
ecaruyer
closed
10 years ago
0
Connectivity rois
#9
ecaruyer
closed
10 years ago
0
Feature request: WM mask, bundle-specific mask
#8
ecaruyer
opened
10 years ago
0
Negative values in DWIs
#7
ecaruyer
opened
10 years ago
0
Affine matrix in Nifti
#6
ecaruyer
opened
10 years ago
0
Added possibility to provide RandomState to all random-related functions...
#5
ecaruyer
closed
10 years ago
0
Random seeds for noise and tissue relaxation time generation
#4
samuelstjean
closed
10 years ago
5
Fix bug in signal simulation for Gaussian model of diffusion.
#3
ecaruyer
closed
10 years ago
0
Moved loading bvals and bvecs at the top
#2
samuelstjean
closed
10 years ago
1
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