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elixir-cloud-aai / CrateGen

Compile GA4GH WES and TES requests from Workflow Run RO-Crates and package WES and TES runs as Workflow Run RO-Crates
Apache License 2.0
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WRROC <> GA4GH API Conversion Tool

License Python 3.11

Synopsis

This project aims to create a library that translates between GA4GH Cloud API schemas and RO-Crate profiles to facilitate reproducibility in scientific research. The tool will enable the packaging and sharing of task/tool and workflow runs, allowing other researchers to reproduce them or use parts of them.

Description

The WRROC <> GA4GH API Conversion Tool is designed to compile RO-Crates from tool and workflow executions in GA4GH Cloud API-powered cloud infrastructures. This will allow easy re-execution of these computational analyses, thus improving the reporting and reproducibility of computational research.

Installation

To install the necessary dependencies, run the following command:

pip install -r requirements.txt

Contributing

We welcome contributions from the community. Please fork the repository and create a pull request for any changes. Make sure to follow the coding standards and include tests for any new functionality.

Code of Conduct

Versioning

License

This project is distributed under the Apache License 2.0, a copy of which is also available in LICENSE.

Contact

The project is maintained by ELIXIR Cloud & AAI.