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emybart415 / Deduper-ebart

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Check Strandedness Function #1

Open ivango17 opened 1 year ago

ivango17 commented 1 year ago

Something you could try is to make the function return a true or false depending on strandedness so that you can use the output of the function as an argument for the Adjust for Softclipping function (eg. AdjustForSoftclipping(startPos. CIGAR, CheckStrandedness(BitFlag))).