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emybart415 / Deduper-ebart

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Sam File Sorting #2

Open ivango17 opened 11 months ago

ivango17 commented 11 months ago

I would suggest using samtools prior to your python script. However, PySAM may be an option if you really wanted to integrate the two.

Leslie-C commented 11 months ago

"Yes" to using samtools outside of Python script, "No" to using PySAM in the main branch of your repo. You could implement a solution using PySAM in a separate branch if you'd like.