epiverse-trace cfr issues

epiverse-trace / cfr

R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

https://epiverse-trace.github.io/cfr/

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issues

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Vignette linking individual data methods and {cfr} package functions

#170 adamkucharski opened 1 week ago
0
Update `CITATION.cff`

#169 github-actions[bot] opened 3 weeks ago
0
CRAN release 0.1.2

#168 adamkucharski closed 3 weeks ago
0
Update `.estimate_severity.Rd`

#167 joshwlambert closed 2 weeks ago
2
Update `<epiparameter>` class name in documentation

#166 joshwlambert opened 3 weeks ago
0
Expected outcomes lower than number of deaths

#165 CarmenTamayo opened 1 month ago
1
Faster alternative to stats:binom.test

#164 adamkucharski opened 1 month ago
1
Include age structure

#163 adamkucharski opened 1 month ago
0
Sampling uncertainty for under ascertainment

#162 adamkucharski opened 1 month ago
0
Use internal checking function to reduce duplication

#161 Bisaloo opened 2 months ago
1
update reference to `epidist` with `epiparameter`

#160 avallecam opened 2 months ago
0
Release cfr 0.1.2

#159 adamkucharski closed 3 weeks ago
0
Release cfr 0.2.0

#158 adamkucharski closed 1 month ago
1
Including uncertainty in baseline CFR for underascertainment estimation

#157 adamkucharski opened 3 months ago
0
Accounting for different delays to death and recovery

#156 adamkucharski closed 1 month ago
2
Check Turkey underascertainment estimate

#155 adamkucharski closed 1 month ago
1
Statistically consistent way to handle E(known outcomes) < deaths

#154 adamkucharski opened 3 months ago
0
Remove normal approximation

#153 adamkucharski closed 3 months ago
9
Difference in the time series of the delay-adjusted rolling Ebola results

#152 adamkucharski closed 1 month ago
2
Change README example to show clearer real-time bias

#151 adamkucharski opened 4 months ago
0
Update `CITATION.cff`

#150 github-actions[bot] closed 4 months ago
0
Increment to dev version 0.1.1.9000

#149 pratikunterwegs closed 4 months ago
0
Final steps before v0.1.1 release

#148 pratikunterwegs closed 4 months ago
0
Release cfr 0.1.1

#147 pratikunterwegs closed 4 months ago
0
Rename output columns to `*_estimate`

#146 pratikunterwegs closed 4 months ago
1
Update `CITATION.cff`

#145 github-actions[bot] closed 5 months ago
0
Rename output columns `*_mean`

#144 pratikunterwegs closed 4 months ago
0
Pre-release v0.1.1

#143 pratikunterwegs closed 5 months ago
0
Mid year cleanup

#142 pratikunterwegs closed 5 months ago
1
Pre-release v0.1.1

#141 pratikunterwegs closed 4 months ago
1
Correct `estimate_outcomes()` explanation

#140 pratikunterwegs closed 5 months ago
1
Fix maths rendering in vignettes

#139 pratikunterwegs closed 5 months ago
2
Mid-year cleanup

#138 pratikunterwegs closed 5 months ago
3
Update test coverage workflow with global Codecov token

#137 pratikunterwegs closed 5 months ago
0
Fix pkgdown YAML

#136 pratikunterwegs closed 6 months ago
0
Fix pkgdown YAML

#135 pratikunterwegs closed 6 months ago
1
Fix argument name in `cfr_time_varying()` documentation

#134 joshwlambert closed 6 months ago
3
fix equation terms

#133 avallecam closed 7 months ago
1
remove estimate_severity() from vignette

#132 avallecam closed 7 months ago
0
replace `cases` by `confirm` for API consistency

#131 avallecam opened 7 months ago
7
CFR stands for Risk or Ratio?

#130 avallecam closed 5 months ago
4
Miscellaneous fixes for {cfr}

#129 pratikunterwegs closed 7 months ago
1
Add message to cfr_rolling()

#128 pratikunterwegs closed 7 months ago
0
Add DPG badge

#127 pratikunterwegs closed 8 months ago
0
Add DPG badge

#126 pratikunterwegs closed 8 months ago
0
Create software permissions and regulations vignette

#125 Bisaloo closed 8 months ago
1
Clarify use of continuous distributions

#124 pratikunterwegs closed 8 months ago
0
is `cfr_rolling()` suitable for small time-series and `cfr_time_varying()` for larget ones?

#123 avallecam closed 7 months ago
7
Fix pseudocode in delay dists vignette

#122 pratikunterwegs closed 9 months ago
0
add comma when using an `epidist` class object in `density()`

#121 avallecam closed 9 months ago
3