Finished adding evalAdmix with the correct process to download it in the same way as ngsadmix, but there seems to be an issue with cyclic dependency. This is the error and dag debug message:
Building DAG of jobs...
candidate job all
wildcards:
candidate job postprocess_ngsadmix
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, min_maf=0.05, K=1, rep=1
candidate job run_ngsadmix
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, min_maf=0.05, K=1, rep=1
candidate job bcf2beagle_gl_gather
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0
candidate job bcf2beagle_gl_scatter
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, scaff_grp=scaff_grp_1
candidate job bcf_thin_gather
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0
candidate job bcf_thin_scatter
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, scaff_grp=scaff_grp_1
candidate job bcf_thin_gather
wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0
CyclicGraphException in rule bcf_thin_gather in file /scratch2/hmoyle/snakeflows/mega-post-bcf-exploratory-snakeflows/workflow/rules/bcftools_thin.smk, line 33:
Cyclic dependency on rule bcf_thin_gather.
hmoyle
commented
2 months ago
Finished adding evalAdmix with the correct process to download it in the same way as ngsadmix, but there seems to be an issue with cyclic dependency. This is the error and dag debug message: Building DAG of jobs... candidate job all wildcards: candidate job postprocess_ngsadmix wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, min_maf=0.05, K=1, rep=1 candidate job run_ngsadmix wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, min_maf=0.05, K=1, rep=1 candidate job bcf2beagle_gl_gather wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0 candidate job bcf2beagle_gl_scatter wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, scaff_grp=scaff_grp_1 candidate job bcf_thin_gather wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0 candidate job bcf_thin_scatter wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0, scaff_grp=scaff_grp_1 candidate job bcf_thin_gather wildcards: bcf_id=test, bcfilt=snps05, sampsub=all, thin_int=0, thin_start=0 CyclicGraphException in rule bcf_thin_gather in file /scratch2/hmoyle/snakeflows/mega-post-bcf-exploratory-snakeflows/workflow/rules/bcftools_thin.smk, line 33: Cyclic dependency on rule bcf_thin_gather.