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evo-design
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evo
Biological foundation modeling from molecular to genome scale
Apache License 2.0
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Release of the data
#88
ReaganGen
opened
1 day ago
0
GPU error with DataParallel
#86
UsmanMahmood8
opened
2 weeks ago
1
frameworks for FSDP and model/pipeline parallelism
#85
adrienchaton
opened
3 weeks ago
0
Clarification on Fine-Tuning with Special Tokens (e.g., <cas9>) in Evo Model
#83
MarcAmil30
closed
3 weeks ago
1
why inference with kv cache have problems?
#82
objectnoppppppp
opened
3 weeks ago
0
add triton to requirements
#81
brianhie
closed
4 weeks ago
0
Pretrain
#80
multydoffer
opened
2 months ago
0
update readme
#79
brianhie
closed
2 months ago
0
fix: minor typos in hello_evo.ipynb
#78
vasa-develop
closed
2 months ago
0
Update README.md to torch.no_grad()
#77
garykbrixi
closed
2 months ago
0
Estimate Required RAM for inference
#76
fmaa23
opened
3 months ago
0
more prompt scheme documentation?
#65
pan-genome
closed
3 months ago
1
Require for GWAS(genome wide association studies)
#64
1633347510
closed
3 months ago
1
Scoring Question
#63
MarcAmil30
closed
3 months ago
1
PEFT Prompt Tuning: forward() got an unexpected keyword argument 'inputs_embeds'
#62
mikeleske
opened
4 months ago
0
issue on model.to("cuda") with device_map="auto"
#61
UmutAlihan
opened
4 months ago
1
Memory usage?
#60
bio-rat
closed
4 months ago
1
How can I use multiple graphics cards to fine tune this model
#59
qijishinidie
closed
4 months ago
2
Limiting attention radius and extracting embeddings
#58
george-henderson
closed
3 months ago
1
AttributeError: 'InferenceParams' object has no attribute 'fused_ft_kernel'
#57
qijishinidie
closed
4 months ago
1
131k base seems to output non-DNA characters
#56
cosmicBboy
closed
4 months ago
4
Load fixed Evo v1.1 model checkpoint
#55
brianhie
closed
5 months ago
0
Update README.md
#54
Zymrael
closed
5 months ago
0
ModuleNotFoundError: No module named 'transformers_modules.togethercomputer.evo-1-131k-base.9562f3fdc38f09b92594864c5e98264f1bfbca33.tokenizer'
#53
adrienchaton
opened
5 months ago
8
hello_evo.ipynb code error
#52
yyyyyuzj
closed
3 weeks ago
1
Scoring DNA with lineages
#51
hmms117
closed
3 months ago
1
T4 GPUs support? Any recommendation
#50
ggkngktrk
opened
5 months ago
1
gene essentiality
#49
JunboShen
closed
3 months ago
1
TORCH_HOME not used when downloading models
#48
james-vincent
closed
5 months ago
2
Is it posisble for us to access the embeddings layer?
#47
HelloWorldLTY
closed
3 months ago
2
Default pretrained_model_path is personal directory
#46
leannmlindsey
closed
6 months ago
0
What was the train/val data split you used during pretraining?
#45
ricomnl
opened
6 months ago
0
Fine-tune evo to achieve a sequence-level prediction
#44
jingliezhou
opened
6 months ago
0
RNA sequence
#43
TiantianZhu110
closed
3 months ago
2
Err
#42
leilichun
closed
6 months ago
1
Release of Pre-training Data Preprocess Scripts
#41
KatarinaYuan
opened
6 months ago
1
Questions about the performance of evo
#40
HelloWorldLTY
closed
6 months ago
1
OSError: togethercomputer/evo-1-131k-base does not appear to have a file named pytorch_model.bin, tf_model.h5, model.ckpt or flax_model.msgpack.
#39
jingliezhou
closed
3 months ago
2
add links for colab and nitro bio wrapper
#38
exnx
closed
6 months ago
0
Prompt for virus and plasmid generation
#37
apcamargo
closed
3 months ago
1
Dose someone have idea about issues such as "'MHA' is not defined"?
#36
xmz111
closed
6 months ago
1
GPU memory usage
#35
WangLabTHU
opened
7 months ago
1
Finetuning on a sequenceClassification task
#34
leannmlindsey
opened
7 months ago
4
OpenGenome Dataset
#33
leannmlindsey
closed
6 months ago
1
Extracting EVO representations rather than logits
#32
amoskalev
opened
7 months ago
5
Modify generation function to return log probability per token for further sequence analysis
#31
AhmedKazlak
opened
7 months ago
0
update readme with links to Together web UI
#30
exnx
closed
7 months ago
1
Together web UI added to readme
#29
exnx
closed
7 months ago
0
Release of OpenGenome
#28
KatarinaYuan
closed
7 months ago
2
Training code availability?
#27
chaitjo
closed
6 months ago
2
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