issues
search
evoreprice
/
lmdPaper
Code to generate the manuscript, figures and data for "Gene expression profiling of reproductive meristem types in early rice inflorescences by laser microdissection" (2016)
http://dx.doi.org/10.1111/tpj.13147
0
stars
1
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Fix scale bars on N4 morphology panel
#34
TomHarrop
closed
8 years ago
0
Scale bars in lmdFigure
#33
TomHarrop
closed
8 years ago
1
Add acknowledgements
#32
TomHarrop
closed
8 years ago
0
Write a conclusion
#31
TomHarrop
closed
8 years ago
0
Change ePBM/SBM to ePBM/AM
#30
TomHarrop
closed
8 years ago
1
Upload libraries (+/- BAM files)
#29
TomHarrop
closed
8 years ago
1
Emphasize that this is quantitative data from very young panicles
#28
TomHarrop
closed
8 years ago
0
Realign clade labels on f_madsComp
#27
TomHarrop
closed
8 years ago
0
Suppress date when compiling supporting information
#26
TomHarrop
closed
8 years ago
0
Better title
#25
TomHarrop
closed
8 years ago
0
f_hb: add some whitespace between "sets" of expression
#24
TomHarrop
closed
8 years ago
1
Homeobox discussion
#23
TomHarrop
closed
8 years ago
0
Comment on comparisons to in situ genes
#22
TomHarrop
closed
8 years ago
1
Rearrange panels on f_alog
#21
TomHarrop
closed
8 years ago
0
Synch scripts
#20
TomHarrop
closed
8 years ago
0
Incorporate knitting the manuscript into pipeline
#19
TomHarrop
closed
8 years ago
0
Synchronise script names with pipeline steps
#18
TomHarrop
closed
8 years ago
0
Add SPL expression (and tree?)
#17
TomHarrop
closed
8 years ago
2
Add number of genes detected in each library to f_gsea
#16
TomHarrop
closed
8 years ago
0
Make two clustering figures in SI into panels of one figure
#15
TomHarrop
closed
8 years ago
0
What happened to Table S2?
#14
TomHarrop
closed
8 years ago
2
Clarify that INDETERMINATE SPIKELET etc. refer to rice genes
#13
TomHarrop
closed
8 years ago
0
Clarify "enrichment" of # of genes vs expression
#12
TomHarrop
closed
8 years ago
0
Mention other ALOG genes in discussion
#11
TomHarrop
closed
8 years ago
2
Discussion: paragraph on hormones
#10
TomHarrop
closed
8 years ago
1
Magnitude of LFCs in f_madsTree
#9
TomHarrop
closed
8 years ago
4
Re-label nodes in tree
#8
TomHarrop
closed
9 years ago
0
RAG label borked in mads tree
#7
TomHarrop
closed
9 years ago
1
Add alternative names to oryza genes in phylogeny
#6
TomHarrop
closed
9 years ago
1
margin on sf_pca doesn't include all labels
#5
TomHarrop
closed
8 years ago
0
Venn diagramme of detected genes for supp.
#4
TomHarrop
closed
8 years ago
0
Fix patterns in *in situ* table
#3
TomHarrop
closed
9 years ago
1
Combine supplementary figure and table comparing in situ results
#2
TomHarrop
closed
8 years ago
1
rewrite results to clarifiry differences b/w f_gsea and f_mfuzz
#1
TomHarrop
closed
9 years ago
0