Jenkins Build-Status

AWS HWC Local

Falcon Genome CLI

This project is the command line interface for the Falcon Accelerated Genomics Pipelines. Test

Build

1. Build and install

   mkdir Release; cd Release
   cmake -DCMAKE_BUILD_TYPE=Release ..
   make
   make test
   make install

   This will automatically install the fcs-genome binary to ~/.falcon-genome/fcs-genome/${version}/. If the default install path needs to be changed, it can be done by adding -DCMAKE_INSTALL_PREFIX=

2. Choose which platform to deploy (aws, hwc, aliyun). This option mostly affect how the license is configured. If left blank, the default license mode is flexlm.

   mkdir Release_AWS; cd Release_AWS
   cmake -DCMAKE_BUILD_TYPE=Release -DDEPLOYMENT_DST=aws ..
   make
   make test
   make install

   Or:

   mkdir Release_HWC; cd Release_HWC
   cmake -DCMAKE_BUILD_TYPE=Release -DDEPLOYMENT_DST=hwc ..
   make
   make test
   make install

3. Build in Debug mode:

   mkdir Debug; cd Debug
   cmake -DCMAKE_BUILD_TYPE=Debug -DCMAKE_INSTALL_PREFIX=`pwd`/install ..