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famuvie
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breedR
Statistical methods for forest genetic resources analysts
http://famuvie.github.io/breedR/
GNU General Public License v3.0
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Missing values in coordinates
#65
famuvie
opened
8 years ago
0
Move file .breedRrc to a platform-specific convenient place
#64
famuvie
opened
8 years ago
0
incidence matrix for pec
#63
famuvie
opened
8 years ago
0
Competition diagnosis
#62
famuvie
opened
8 years ago
0
References for the competition model
#61
famuvie
opened
8 years ago
0
Multiple genetic and spatial components
#60
famuvie
opened
8 years ago
0
Acount for irregularly spaced trials
#59
famuvie
opened
8 years ago
0
airemlf90' had status 123
#58
JanKowalczyk
closed
7 years ago
2
breedr_ar not in namespace
#57
timflutre
closed
8 years ago
3
Can't build from repo: img sources for building vignettes not included
#56
timflutre
closed
8 years ago
2
Pedigrees with unobserved descendants in `add_animal` models
#55
stebif68
closed
8 years ago
6
tests: dependency on spam, and loading breedR datasets
#54
famuvie
opened
8 years ago
0
Compatibility of remote computation and grid search of AR parameters
#53
famuvie
opened
8 years ago
0
variogram(): control the number of pairs used to compute each value
#52
famuvie
closed
8 years ago
0
real zeros unadvertedly treated as NAs
#51
famuvie
closed
8 years ago
2
Implement interface for OPTIONS
#50
famuvie
closed
8 years ago
1
Error msg. for pedigrees with same codes for founders and offspring
#49
famuvie
opened
8 years ago
0
pedigree spec: allow for character or factor codifications
#48
famuvie
opened
8 years ago
0
competition model w/o pec requires initial variance
#47
famuvie
closed
8 years ago
0
install only the binaries corresponding to the system architecture
#46
famuvie
closed
8 years ago
1
Use 64bit progsf90 when possible
#45
famuvie
closed
8 years ago
0
use viridis as default sequential colormap
#44
famuvie
opened
8 years ago
0
parallelise grid search in AR models
#43
famuvie
opened
8 years ago
0
summary(): include computation time
#42
famuvie
opened
9 years ago
0
Reporting inner or full knots
#41
famuvie
opened
9 years ago
0
Bug: check for symmetry gets confused by names
#40
famuvie
closed
8 years ago
0
Use theme_bw() by default in breedR plots
#39
famuvie
opened
9 years ago
0
Help page for extraction functions
#38
famuvie
opened
9 years ago
0
Excesive memory consumption building AR model
#37
JanKowalczyk
closed
8 years ago
6
Testing issues
#36
famuvie
closed
7 years ago
0
Enable compare.plots() to compare variograms under the same scale
#35
famuvie
opened
9 years ago
1
Error msg when response is not found
#34
famuvie
opened
9 years ago
0
Provide automatically a spatial autocorrelation test on residuals
#33
famuvie
opened
9 years ago
2
Provide methods to assess the precision and significance of variance components
#32
famuvie
opened
9 years ago
0
Report p-values for the estimates of variance components
#31
famuvie
closed
9 years ago
2
Multitrait support
#30
famuvie
closed
7 years ago
0
Specific knot locations in splines model
#29
famuvie
opened
9 years ago
1
Automatically switch to 'em' method for certain models
#28
famuvie
opened
9 years ago
0
AR model Error: non-conformable matrix dimensions in x %*% y
#27
famuvie
closed
9 years ago
1
Provide an appropriate R2 coefficient of determination
#26
famuvie
opened
9 years ago
0
Variogram scale
#25
famuvie
closed
9 years ago
1
Error parsing results in models with many effects
#24
famuvie
closed
9 years ago
0
Include some 'generic' model
#23
famuvie
closed
9 years ago
2
Ability to specify correlated random effects
#22
famuvie
opened
9 years ago
0
Extractor function for breeding values
#21
famuvie
closed
8 years ago
2
More detailed documentation on the metagene datasets
#20
famuvie
opened
9 years ago
0
logLik() does not retrieve the number of parameters of the model nor the rank
#19
famuvie
closed
9 years ago
0
Interface for setting the convergence criterion in REML
#18
famuvie
closed
7 years ago
1
summary(): include n_iterations
#17
famuvie
opened
9 years ago
0
Heritability and its SE
#16
famuvie
closed
8 years ago
0
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