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fanagislab
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EndHiC
EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to assemble large contigs into chromosomal-level scaffolds.
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Unidentified problem with input files causes EndHiC to consume all memory until it crashes
#13
hazmup
opened
5 months ago
3
what should I do after mapping the short contigs to cluster?
#12
utpala101
opened
6 months ago
0
polyploids
#11
Rhia15
opened
6 months ago
1
Error Moving Summary Files and Reporting Total Cluster Number
#10
kbarslan
closed
8 months ago
2
how to use asm_error_check.pl results to continue the pipeline?
#9
xiekunwhy
opened
11 months ago
3
endhic.pl issues
#8
HaoWenhy
opened
12 months ago
3
endhic to juicebox
#7
cyycyj
opened
1 year ago
5
Any advice for improve the scaffolding level using endhic ?
#6
zhenwenliu
opened
1 year ago
1
Applicability with Omni-C?
#5
SamCT
opened
1 year ago
4
0 of 18903 contigs were anchored into 0 chromosomes.
#4
Jwindler
opened
1 year ago
0
non-model species
#3
andreaschavez
opened
1 year ago
5
Created README.md markdown file
#2
JonEilers
opened
1 year ago
0
question about simulated dataset
#1
guanttttt
opened
1 year ago
1