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fethalen
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Patchwork
Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data
GNU General Public License v3.0
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isoverlapping` not defined?
#54
deyuanyang
closed
6 months ago
16
PackageCompiler: compiling nonincremental system image ERROR
#53
qilu521
closed
6 months ago
1
Masking
#52
ClaraKoehne
closed
1 year ago
0
Dna output
#51
ClaraKoehne
closed
1 year ago
0
Hpc problems
#50
ClaraKoehne
closed
1 year ago
0
Cannot install Patchwork on HPC
#49
bheimbu
closed
1 year ago
6
Benchmark
#48
ClaraKoehne
closed
1 year ago
0
Compilation fails: could not precompile PackageCompiler
#47
mptrsen
closed
6 months ago
1
Error during installation: Conda fails to resolve dependencies
#46
mptrsen
closed
6 months ago
2
Error during trimming alignments while running test dataset
#45
Jimaz
closed
1 year ago
2
Update clustering.jl
#44
Jimaz
closed
2 years ago
0
Update sliding.jl
#43
Jimaz
closed
2 years ago
0
Update sequencerecord.jl
#42
Jimaz
closed
2 years ago
0
Update diamond.jl
#41
Jimaz
closed
2 years ago
0
Update alignment.jl
#40
Jimaz
closed
2 years ago
0
update alignmentconcatenation.jl
#39
Jimaz
closed
2 years ago
0
Update alignedregion.jl
#38
Jimaz
closed
2 years ago
0
BoundsError when merging overlapping hits
#37
etkayapar
closed
2 years ago
3
Error in trimming step
#36
fjruizruano
closed
2 years ago
4
Patchwork error after alignment trimming.
#35
ngroberts
closed
2 years ago
3
Sliding
#34
fethalen
closed
2 years ago
0
Error: Missing source file for PackageCompiler [9b87118b-4619-50d2-8e1e-99f35a4d4d9d
#33
o-william-white
closed
2 years ago
2
Sliding
#32
fethalen
closed
2 years ago
0
Qseq-translated
#31
fethalen
closed
2 years ago
0
Fastq input
#30
ClaraKoehne
closed
2 years ago
0
Uscos
#29
fethalen
closed
2 years ago
0
Fastq input
#28
ClaraKoehne
closed
2 years ago
0
fix IDs
#27
ClaraKoehne
closed
2 years ago
0
changed names of output sequences
#26
fethalen
closed
2 years ago
0
Remove Warnings
#25
ClaraKoehne
closed
2 years ago
0
Multifasta
#24
fethalen
closed
2 years ago
0
Otus
#23
fethalen
closed
2 years ago
0
Fix BoundsError
#22
ClaraKoehne
closed
2 years ago
0
Docs refactoring
#21
fethalen
closed
3 years ago
0
Sequence output
#20
fethalen
closed
3 years ago
0
sequence-output
#19
ClaraKoehne
closed
3 years ago
0
input sequences are now ungapped before makedb
#18
fethalen
closed
3 years ago
0
global alignments now include full ref
#17
fethalen
closed
3 years ago
0
fixed merging issue
#16
fethalen
closed
3 years ago
0
conda build Patchwork package
#15
ClaraKoehne
closed
3 years ago
0
occupancy
#14
ClaraKoehne
closed
3 years ago
0
Create LICENSE
#13
fethalen
closed
3 years ago
0
Implemented gap removal
#12
fethalen
closed
3 years ago
0
occupancy
#11
ClaraKoehne
closed
3 years ago
0
finished mergeoverlapping function
#10
fethalen
closed
3 years ago
0
fixed dependency issues
#9
fethalen
closed
3 years ago
0
hit-stitching
#8
fethalen
closed
3 years ago
0
hit-stitching
#7
fethalen
closed
3 years ago
1
removed print_logo function
#6
fethalen
closed
3 years ago
0
gff-parser
#5
ClaraKoehne
closed
3 years ago
0
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