search

fhircat / FHIRCat

Enabling the Semantics of FHIR and Terminologies for Clinical and Translational Research
5 stars 0 forks source link

readme

FHIRCat - Enabling the Semantics of FHIR and Terminologies for Clinical and Translational Research

Specific Aims

The objective of this project is to design, develop and evaluate a novel informatics platform known as FHIRCat that leverages Semantic Web and Linked Data technologies, FHIR models/profiles, and ontologies for effective standards-based data integration and distributed analytics, enabling high-quality reproducible clinical and translational research. Our specific aims are:

This work is supported by funding from NIH BD2K (U01 HG009450) and FHIRCat (R56 EB028101, R01 EB030529).

For more information, contact Guoqian Jiang jiang.guoqian@mayo.edu and Emily Pfaff epfaff@email.unc.edu.

Publications/Presentations

Title Type Location
Developing an ETL tool for converting the PCORnet CDM into the OMOP CDM to facilitate the COVID-19 data integration Publication J Biomed Inform. 2022 Jan 22;127:104002.doi: 10.1016/j.jbi.2022.104002.
Consistency Check of the FHIR W5 Classification System in FHIR Modeling: Towards Improved Semantic Representation of FHIR RDF Podium Abstract AMIA 2022 Informatics Summit Oral Presentations
Implementing a New FHIR RDF Specification for Semantic Clinical Data Using a JSON-LD-based Approach Publication SWAT4HCLS, 2022
FHIR RDF Data Transformation and Validation Framework and Clinical Knowledge Graphs: Towards Explainable AI in Healthcare Tutorial SWAT4HCLS, 2022
Building Clinical Knowledge Graphs in FHIR RDF for Explainable AI Applications in Healthcare Poster PSB 2022
Development of a FHIR RDF data transformation and validation framework and its evaluation Publication J Biomed Inform. 2021 May;117:103755. doi: 10.1016/j.jbi.2021.103755. Epub 2021 Mar 26.
Exploring JSON-LD as an Executable Definition of FHIR RDF to Enable Semantics of FHIR Data Publication AMIA Annu Symp Proc. 2021 Jan 25;2020:1140-1149.eCollection 2020.