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fiberseq
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fiberseq-smk
Snakemake pipeline for processing fiberseq data
https://fiberseq.github.io/fiberseq-smk/
MIT License
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Cannot execute the test run
#16
zhuweix
closed
8 months ago
2
Error during smk-pipeline: "fibertools: error: unrecognized arguments: --nuc-size-cutoff 85"
#15
NurislamSheih
closed
10 months ago
2
Remove need to install fibertools byitself and add it to the conda env.
#14
mrvollger
closed
1 year ago
0
conda env not being loaded on jobs/rules using sge-gs cluster pfofile.
#13
MorganHamm
closed
1 year ago
2
Dev
#12
mrvollger
closed
1 year ago
0
Move to fiberseq-smk v0.1
#11
mrvollger
closed
1 year ago
0
Add fibertools-rs m6a caller
#10
mrvollger
closed
1 year ago
0
refactor: Update output locations and include fibertools "all" output
#9
mrvollger
closed
1 year ago
1
Snakemake not receiving error message when job is killed on checkpoint
#8
bmallo
closed
1 year ago
1
Modify filename defaults (output)
#7
adrisede
closed
1 year ago
1
refactor: adding in fibertools-rs and partial run option
#6
mrvollger
closed
1 year ago
1
Qc plots
#5
sjneph
closed
2 years ago
0
fix: zero length nucleosome calls and remove possibility to try and index in a zero length nucleosome array. Also add a compression script for log files.
#4
mrvollger
closed
2 years ago
1
fix HMM invalid range warnings
#3
sjneph
closed
2 years ago
0
assert for missing ccs .pbi file not working
#2
MorganHamm
closed
2 years ago
0
`fiberseq-smk` queue
#1
mrvollger
closed
2 years ago
0