finncatling lap-risk issues

finncatling / lap-risk

Uncertainty-aware mortality risk modelling in emergency laparotomy, using data from the NELA.

MIT License

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issues

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Update readme with citation

#164 finncatling closed 2 years ago
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Update readme with citation

#163 finncatling closed 2 years ago
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Updated study title

#162 finncatling closed 2 years ago
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Update study title

#161 finncatling closed 2 years ago
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Change novel model name to RUNE in calibration plots

#160 finncatling closed 2 years ago
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Change model name

#159 finncatling closed 2 years ago
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Add histograms of predicted probabilities to calibration plots

#158 finncatling closed 2 years ago
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Add histograms of predictions to calibration plots

#157 finncatling closed 2 years ago
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Update manuscript title

#156 finncatling closed 2 years ago
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Update manuscript title

#155 finncatling closed 2 years ago
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Simpler example risk distributions

#154 finncatling closed 3 years ago
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Simpler Figure 1 (example risk distributions)

#153 finncatling closed 3 years ago
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Verify raw data checksum

#152 finncatling closed 3 years ago
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Verify source data checksum when initially loading

#151 finncatling closed 3 years ago
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Export correct lactate imputer

#150 finncatling closed 3 years ago
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Production lactate imputer uses wrong transformer

#149 finncatling closed 3 years ago
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Switch to US creatinine and urea units

#148 finncatling closed 3 years ago
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Rescale data, not tick labels, when changing urea and creatinine units

#147 finncatling closed 3 years ago
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Remove missingness indicator PDPs

#146 finncatling closed 3 years ago
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Remove lactate & albumin missingness indicators from novel model PDP figure

#145 finncatling closed 3 years ago
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Alter urea & creatinine units

#144 finncatling closed 3 years ago
3
Bump py from 1.9.0 to 1.10.0

#143 dependabot[bot] closed 3 years ago
1
Bump jinja2 from 2.11.2 to 2.11.3

#142 dependabot[bot] closed 3 years ago
1
Bump pillow from 8.0.1 to 8.1.1

#141 dependabot[bot] closed 3 years ago
1
Bump pygments from 2.7.2 to 2.7.4

#140 dependabot[bot] closed 3 years ago
1
Report mode for some categorical variables

#139 finncatling closed 3 years ago
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Report mode for CVS, resp, soiling and malignancy

#138 finncatling closed 3 years ago
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Change categorical variable summary statistics in Table 1

#137 finncatling closed 3 years ago
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Export of production assets

#136 finncatling closed 3 years ago
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Class to handle risk prediction in production

#135 finncatling closed 3 years ago
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Tidying up pre v1.0

#134 finncatling closed 3 years ago
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Change to negative index notation

#133 finncatling closed 3 years ago
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Switch to negative index notation in figures

#132 finncatling closed 3 years ago
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Still need to re-generated the samples novel model calibration curves

#131 finncatling closed 3 years ago
1
Changed 'Re-fit' to 'Re-fitted'

#130 finncatling closed 3 years ago
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Tidy up repo before making public

#129 finncatling closed 3 years ago
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Export everything needed for novel model deployment

#128 finncatling closed 3 years ago
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Production model training and sanity checking

#127 finncatling closed 3 years ago
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Should use 're-fitted' as an adjective instead of 're-fit'

#126 finncatling closed 3 years ago
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Added median risk distribution ranges

#125 finncatling closed 3 years ago
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Need to report medians as well as 95% CIs on risk distribution dispersion

#124 finncatling closed 3 years ago
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Creatinine / urea redaction plot. Removed old code

#123 finncatling closed 3 years ago
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Refine PDF figure for creatinine / urea redaction

#122 finncatling closed 3 years ago
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Novel model samples eval, plus extras

#121 finncatling closed 3 years ago
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Change model comparison to use evaluations from novel model distributions

#120 finncatling closed 3 years ago
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Amend demographic table to only use NELA calculator-complete test cases

#119 finncatling closed 3 years ago
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Example risk distribution plots

#118 finncatling closed 3 years ago
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Plot of example predicted risk distributions

#117 finncatling closed 3 years ago
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Demographic table

#116 finncatling closed 3 years ago
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Script for initial data wrangling

#115 finncatling closed 3 years ago
0