search

fmfi-svt / steel-wok

Exactly what it sounds like
0 stars 0 forks source link

readme

steel-wok

Exactly what it sounds like

Installation

All the dependencies should be in requirements.txt. Hence, installation should be as easy as running:

pip install -r requirements.txt

Since many of the scripts included here use playwright, we suggest installing its dependencies too:

playwright install

Running

Should be as easy as running

python extract-wos-article.py https://www.webofscience.com/wos/woscc/full-record/WOS:000690353600001

Which would then produce output similar to

{'DOI': '10.1007/s11262-021-01866-5',
 'article_no': '',
 'authors': [{'names': 'Brona', 'surname': 'Brejova'},
             {'names': 'Kristina', 'surname': 'Borsova'},
             {'names': 'Viktoria', 'surname': 'Hodorova'},
             {'names': 'Viktoria', 'surname': 'Cabanova'},
             {'names': 'Lenka', 'surname': 'Reizigova'},
             {'names': 'Evan D.', 'surname': 'Paul'},
             {'names': 'Pavol', 'surname': 'Cekan'},
             {'names': 'Boris', 'surname': 'Klempa'},
             {'names': 'Jozef', 'surname': 'Nosek'},
             {'names': 'Tomas', 'surname': 'Vinar'}],
 'citing_summary': ['WOS:000718302600032', 'WOS:000707419500038'],
 'eissn': '1572-994X',
 'issn': '0920-8569',
 'issue': '6',
 'journal': 'VIRUS GENES',
 'page': '556-560',
 'pubdate': 'DEC 2021',
 'publisher': 'SPRINGER, VAN GODEWIJCKSTRAAT 30, 3311 GZ DORDRECHT, '
              'NETHERLANDS',
 'times_cited': '2',
 'title': 'A SARS-CoV-2 mutant from B.1.258 lineage with increment H69/ '
          'increment V70 deletion in the Spike protein circulating in Central '
          'Europe in the fall 2020',
 'volume': '57',
 'year': '2021'}

To debug how the script works (i.e. by not making the Chromium that's being started headless), you can specify the --debug option.

Should you want to make use of a proxy, e.g. SOCKS proxy running on port 11000 on localhost, you can do so by specifying further options:

python extract-wos-article.py https://www.webofscience.com/wos/woscc/full-record/WOS:000690353600001 --debug --proxy-server socks://localhost:11000

Development

Install the pre-commit hook that checks the correct formatting:

pre-commit install