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forihuelaespina / OCTant

Suite of tools for OCT analysis
GNU General Public License v3.0
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Algorithm for measuring layer thickness #8

Open forihuelaespina opened 6 years ago

forihuelaespina commented 6 years ago

An algorithm should be provided to estimate layer width departing from picture resolution and image segmentation.

forihuelaespina commented 6 years ago

An initial algorithm for measuring thickness has been coded. The current algorithm "assumes" that layers neatly traverse the whole OCT scan. This needs to be alleviated.

forihuelaespina commented 5 years ago

Since v0.2alpha. The algorithm no longer assumes that the layer traverses the whole OCT scan. Instead, the average thickness for each layer is estimated from pixels segmented to that layer. The average is made pixel column-wise and applied over a paremeterizable spatial window.