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fulcrumgenomics / dagr

A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs
MIT License
69 stars 14 forks source link

Fix bug in SortBam sort order option #404

Closed mjhipp closed 5 months ago

mjhipp commented 2 years ago

Currently it does -s 'Some(TemplateCoordinate)' rather than -s TemplateCoordinate

codecov-commenter commented 2 years ago

Codecov Report

Merging #404 (1abd9dd) into main (c6c3366) will not change coverage. The diff coverage is n/a.

@@           Coverage Diff           @@
##             main     #404   +/-   ##
=======================================
  Coverage   91.92%   91.92%           
=======================================
  Files          31       31           
  Lines        1164     1164           
  Branches       80       75    -5     
=======================================
  Hits         1070     1070           
  Misses         94       94
Flag Coverage Δ
unittests 91.92% <ø> (ø)

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