Concatenate dwi.nii.gz, dwi.bval & dwi.bvec

garikoitz / launchcontainers

MIT License

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Closed leandrolecca closed 1 year ago

leandrolecca commented 1 year ago

Updates:

Change 'acq-' label to 'dir-' before the phase-encoding direction (https://bids-specification.readthedocs.io/en/stable/appendices/entities.html#dir)
Given a phase-encoding direction, concatenate its multiple acquisitions (e.g., b1000,b2500)
rtppreproc config.json : change 'acqd' to 'rpe_dir' to be clearer
Included mrtrix3 in must_install.txt

garikoitz commented 1 year ago

Leandro, I am merging this, I understand by the comments that now it takes more than two shells, thanks!