gaurav taxondna issues - Githubissues

gaurav / taxondna

Taxonomy-aware DNA sequence processing toolkit

http://www.ggvaidya.com/taxondna/

GNU General Public License v2.0

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issues

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problem running SquenceMatrix on windows11 64x

#101 avalerioc opened 2 years ago
1
I have a problem running Sequence Matrix on mac with big sur, it does not open at all.

#100 RomiBRC opened 2 years ago
2
problems to write Species name for the analysis

#99 Cyberia1978 opened 2 years ago
1
Problems with importing multiple files

#98 NicolasLouw opened 2 years ago
0
Error while trying to open despite following advice

#97 NicolasLouw opened 2 years ago
4
Recognize BEGIN CHARSETS;

#96 djlohman opened 2 years ago
0
Allow addition of sequences that aren't the same length as others within that locus file

#95 djlohman opened 2 years ago
0
Add the ability to degenerate loci

#94 djlohman closed 2 years ago
0
Incorporate the ability to degenerate sequences that have codon information.

#93 djlohman opened 2 years ago
0
Color code sequences with issues

#92 djlohman opened 2 years ago
0
Undo button

#91 djlohman opened 2 years ago
0
Add Ns

#90 djlohman opened 2 years ago
0
Exclude loci or taxa from data export if they did not sequence/capture above a threshold

#89 djlohman opened 2 years ago
2
Extraneous `us` being added to charset names

#88 gaurav opened 3 years ago
0
Fix the right click menu on the column headers

#87 gaurav opened 3 years ago
0
Consistently use underscores for all export formats

#86 gaurav opened 3 years ago
0
Move the import and export options under the File menu

#85 gaurav opened 3 years ago
0
Remove Citation menu and add it to SequenceMatrix

#84 gaurav opened 3 years ago
0
Change default folder for importing an input file

#83 gaurav opened 3 years ago
0
Add Phylip export to splitting dataset into individual loci

#82 gaurav opened 3 years ago
0
Fix export names when splitting dataset into individual loci

#81 gaurav opened 3 years ago
0
Replace export to folder with a native dialog rather than the Java one

#80 gaurav opened 3 years ago
0
Taxon names sometimes don't appear properly until the window is resized

#79 gaurav opened 3 years ago
1
Improve display of pairwise distances

#78 gaurav opened 3 years ago
0
Minor fixes

#77 gaurav opened 3 years ago
0
Clean up code using Spotless

#76 gaurav closed 2 years ago
0
Errors compiling Sequence Matrix

#75 vscmarques closed 3 years ago
2
Make a page for testimonials

#74 gaurav opened 3 years ago
0
Update .gitignore, add JetBrains and Eclipse/Atom files to repo

#73 gaurav closed 3 years ago
0
Move to Maven with Java 11

#72 gaurav closed 3 years ago
0
DistaClusters

#71 gaurav opened 3 years ago
0
Use jpackage to build an App bundle for macOS

#70 gaurav opened 4 years ago
0
problem on MacOS Catalina Java SE6

#69 fhafarache opened 4 years ago
2
Move to Java 8

#68 gaurav closed 3 years ago
0
Make sure we support MalAvi as a testing dataset

#67 gaurav opened 6 years ago
0
System hang on Linux Ubuntu 16.04

#66 kfeilich opened 6 years ago
0
Doesn't run on windows 10?

#65 KimaniNdungu opened 6 years ago
1
Importing >100 FASTA or Nexus files cause hangs on macOS High Sierra

#64 gaurav opened 6 years ago
2
Sequence Matrix: loading file into memory

#63 qiwill opened 8 years ago
11
NullPointerException in BestMatch

#62 gaurav opened 8 years ago
0
Transition from GI numbers to GB numbers

#61 gaurav opened 8 years ago
0
Most of my sequences are not added

#60 LLVJ opened 8 years ago
3
taxon names

#59 bryansmclean opened 8 years ago
1
Experimental species datasets don't have "Genus species" format

#58 gaurav opened 14 years ago
0
Get rid of "null: ..." from the status bar

#57 gaurav opened 14 years ago
0
Clean out bugs from code.google.com (and move any outstanding bugs here)

#56 gaurav opened 14 years ago
0
Positional data repeated several times in one-file-per-column TNT output

#55 gaurav closed 14 years ago
2
Tweak the error messages on overlapped sequences

#54 gaurav opened 14 years ago
0
Cancelling a sequence in PD cancels the sequence next to it

#53 gaurav opened 14 years ago
1
Some kind of checking to ensure data is being correctly manipulated

#52 gaurav opened 14 years ago
1